RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 MYOZ3Q8TDC0 251 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 PGPA6NDG6 321 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 ISLRO14498 428 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 TRGV3P03979 118 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 A0A0G2JLM5 398 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 SERTM2A0A1B0GWG4 89 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 IGHV3-23P01764 117 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 TCRAP04437 139 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 LEMD1Q68G75 181 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 Q6ZS46 218 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 MLST8Q9BVC4 326 aa13.3□□□□□ -0.28
VPS13B-201ENST00000355155 ANKRD17O75179 2603 aaKnown RBP13.29□□□□□ -0.28
VPS13B-201ENST00000355155 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
VPS13B-201ENST00000355155 PSMB8P28062 276 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 GALR1P47211 349 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 CD5LO43866 347 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 C17orf77Q96MU5 243 aa13.29□□□□□ -0.28
VPS13B-201ENST00000355155 USP9YO00507 2555 aaPredicted RBP13.28□□□□□ -0.28
VPS13B-201ENST00000355155 NDUFA4O00483 81 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 PHOX2AO14813 284 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 BUB3O43684 328 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 MEOX2P50222 304 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 RANP62826 216 aaKnown RBP13.28□□□□□ -0.28
VPS13B-201ENST00000355155 HIST2H2BCQ6DN03 193 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 OR5B12Q96R08 314 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 TMEM160Q9NX00 188 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 TENM4Q6N022 2769 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 FAM208BQ5VWN6 2430 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 LTAP01374 205 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
VPS13B-201ENST00000355155 PSG9Q00887 426 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 ZNF702PQ9H963 129 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
VPS13B-201ENST00000355155 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.28
VPS13B-201ENST00000355155 S100PP25815 95 aa13.27□□□□□ -0.28
VPS13B-201ENST00000355155 V9GYV3 84 aa13.27□□□□□ -0.28
VPS13B-201ENST00000355155 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 COX8CQ7Z4L0 72 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 CIARTQ8N365 385 aaPredicted RBP13.27□□□□□ -0.29
VPS13B-201ENST00000355155 BLNKQ8WV28 456 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 MS4A10Q96PG2 267 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 PRSS22Q9GZN4 317 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 LRRK2Q5S007 2527 aa13.27□□□□□ -0.29
VPS13B-201ENST00000355155 ASH1LQ9NR48 2969 aaKnown RBP13.27□□□□□ -0.29
VPS13B-201ENST00000355155 PGPEP1LA6NFU8 196 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 TPPP2P59282 170 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 RAB5BP61020 215 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 KCNIP4Q6PIL6 250 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 NOL4LQ96MY1 436 aaPredicted RBP13.26□□□□□ -0.29
VPS13B-201ENST00000355155 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 IL36BQ9NZH7 164 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 BIN3Q9NQY0 253 aa13.26□□□□□ -0.29
VPS13B-201ENST00000355155 MED13LQ71F56 2210 aa13.25□□□□□ -0.29
VPS13B-201ENST00000355155 NPFFR1Q9GZQ6 430 aa13.25□□□□□ -0.29
VPS13B-201ENST00000355155 MLXQ9UH92 298 aa13.25□□□□□ -0.29
VPS13B-201ENST00000355155 CRYBG3Q68DQ2 2970 aa13.25□□□□□ -0.29
VPS13B-201ENST00000355155 FOXE3Q13461 319 aa13.25□□□□□ -0.29
VPS13B-201ENST00000355155 MRPL53Q96EL3 112 aaKnown RBP13.25□□□□□ -0.29
VPS13B-201ENST00000355155 ARL3P36405 182 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 ELANEP08246 267 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 GNG5P63218 68 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 C16orf54Q6UWD8 224 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 METTL26Q96S19 204 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 LINC00527Q9UJ94 153 aa13.24□□□□□ -0.29
VPS13B-201ENST00000355155 APCP25054 2843 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 HOXA3O43365 443 aaPredicted RBP13.23□□□□□ -0.29
VPS13B-201ENST00000355155 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 KLK15Q9H2R5 256 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 SPTAN1Q13813 2472 aaKnown RBP13.23□□□□□ -0.29
VPS13B-201ENST00000355155 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 SLC17A3O00476 420 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 TMEM183AQ8IXX5 376 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 CLEC5AQ9NY25 188 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 PDZD2O15018 2839 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 CELSR2Q9HCU4 2923 aa13.23□□□□□ -0.29
VPS13B-201ENST00000355155 K7EMT4 169 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 CT83Q5H943 113 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 Q86TA4 180 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 ZNF320A2RRD8 509 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 FAM3BP58499 235 aaPredicted RBP13.22□□□□□ -0.29
VPS13B-201ENST00000355155 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 ZNF331Q9NQX6 463 aaPredicted RBP13.22□□□□□ -0.29
VPS13B-201ENST00000355155 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 URGCP-MRPS24S4R325 110 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 CHD6Q8TD26 2715 aa13.22□□□□□ -0.29
VPS13B-201ENST00000355155 SMIM27A0A1W2PRY6 76 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 UBE2G1P62253 170 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms