RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TEX22C9J3V5 150 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 H3BRM9 83 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 WT1P19544 449 aaPredicted RBP9.07□□□□□ -0.96
CAPN9-202ENST00000354537 ZNF138P52744 262 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 ADIPOQQ15848 244 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 OR9G4Q8NGQ1 327 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 ZC2HC1AQ96GY0 325 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 FRYLO94915 3013 aa9.07□□□□□ -0.96
CAPN9-202ENST00000354537 A0A087X0K7 114 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 A6NDN8 102 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 I3L2K1 104 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
CAPN9-202ENST00000354537 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 LYZP61626 148 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 PSG3Q16557 428 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 GUCD1Q96NT3 240 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 PCNX2A6NKB5 2137 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 GAGE12BA1L429 117 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 C7orf71A4D174 169 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 VSTM5A8MXK1 200 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 FGF6P10767 208 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 APOBEC3AP31941 199 aaPredicted RBP9.06□□□□□ -0.96
CAPN9-202ENST00000354537 CEACAM3P40198 252 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 RASL11BQ9BPW5 248 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 TP73-AS1Q9UF72 201 aa9.06□□□□□ -0.96
CAPN9-202ENST00000354537 INTS1Q8N201 2190 aaKnown RBP9.05□□□□□ -0.96
CAPN9-202ENST00000354537 TRAV8-1A0A0A6YYK1 113 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
CAPN9-202ENST00000354537 H3BRN7 92 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 FAM27E3Q08E93 113 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 SIGLEC15Q6ZMC9 328 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 H3BTX0 84 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 SRSF6Q13247 344 aaKnown RBP9.05□□□□□ -0.96
CAPN9-202ENST00000354537 PDE6HQ13956 83 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 DEFB109BQ30KR1 87 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
CAPN9-202ENST00000354537 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
CAPN9-202ENST00000354537 C9orf118A6NHY6 69 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 IGLV1-47P01700 117 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 CSN3P07498 182 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 HSD52Q0P140 79 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 Q6ZS92 163 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 C22orf34Q6ZV56 151 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 PIP4P1Q86T03 277 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 OR4X2Q8NGF9 303 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 GAGE10A6NGK3 116 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 LHFPL4Q7Z7J7 247 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 FAM57AQ8TBR7 257 aa9.04□□□□□ -0.96
CAPN9-202ENST00000354537 A0A096LNJ9 63 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 C16orf97H3BN30 126 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 MRPS12O15235 138 aaKnown RBP9.03□□□□□ -0.96
CAPN9-202ENST00000354537 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 RBP4P02753 201 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 CRIP1P50238 77 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 INSIG2Q9Y5U4 225 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 IGHV1-3A0A0C4DH29 117 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 AP1S3Q96PC3 154 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
CAPN9-202ENST00000354537 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 SMAD7O15105 426 aaKnown RBP9.02□□□□□ -0.97
CAPN9-202ENST00000354537 NCR2O95944 276 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
CAPN9-202ENST00000354537 PAX8Q06710 450 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 PLGLAQ15195 96 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 CCL17Q92583 94 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 PRELID3AQ96N28 172 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 CSTL1Q9H114 145 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 IGHV3-21A0A0B4J1V1 117 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 A1L4Q6 167 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 SHISA9B4DS77 424 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 H0Y8G0 127 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 BUB1B-PAK6H3BSN5 160 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 HBDP02042 147 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
CAPN9-202ENST00000354537 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 ERASQ7Z444 233 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
CAPN9-202ENST00000354537 RAB1BQ9H0U4 201 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
CAPN9-202ENST00000354537 IGHV3-72A0A0B4J1Y9 119 aa9.01□□□□□ -0.97
CAPN9-202ENST00000354537 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
CAPN9-202ENST00000354537 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms