RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SS18Q15532 418 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 TPTE2P1Q5T6R2 138 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 TEX38Q6PEX7 206 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 LGALS1P09382 135 aaKnown RBP8.21□□□□□ -1.1
COL11A1-201ENST00000353414 ZNF138P52744 262 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 SLC50A1Q9BRV3 221 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 RSPO3Q9BXY4 272 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-201ENST00000353414 LCTP09848 1927 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 EREGO14944 169 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 CA7P43166 264 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.2□□□□□ -1.1
COL11A1-201ENST00000353414 GGTLC1Q9BX51 225 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 GAGE6Q13070 117 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
COL11A1-201ENST00000353414 ASPHD1Q5U4P2 390 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 TEX43Q6ZNM6 134 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 IGHV1-8P0DP01 117 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 EFNB3Q15768 340 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 MLANAQ16655 118 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 IGF2BP2-AS1Q96M15 143 aa8.2□□□□□ -1.1
COL11A1-201ENST00000353414 PSPNO60542 156 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 YPEL1O60688 119 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 SH2D1AO60880 128 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 PVRIGQ6DKI7 326 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 HAPLN4Q86UW8 402 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 YPEL2Q96QA6 119 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 DKK4Q9UBT3 224 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 TMEM178BH3BS89 294 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 NKAPP1Q8N9T2 125 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 ZNF479Q96JC4 524 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 FRMPD3Q5JV73 1810 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
COL11A1-201ENST00000353414 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 ZMAT4Q9H898 229 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 ATP6V0BQ99437 205 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 RNF114Q9Y508 228 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 LRRC37AA6NMS7 1700 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 C22orf46C9J442 243 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 LCN12Q6JVE5 192 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 PRDM13Q9H4Q3 707 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 ABCA1O95477 2261 aa8.19□□□□□ -1.1
COL11A1-201ENST00000353414 A0A087X0K7 114 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 OVOL1O14753 267 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 A0A0A6YYD4 124 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 OVOL3O00110 214 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
COL11A1-201ENST00000353414 VWCEQ96DN2 955 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 C18orf12Q96KH6 178 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.18□□□□□ -1.1
COL11A1-201ENST00000353414 CD177Q8N6Q3 437 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 RS1O15537 224 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 PRCDQ00LT1 54 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 TM2D1Q9BX74 207 aa8.18□□□□□ -1.1
COL11A1-201ENST00000353414 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
COL11A1-201ENST00000353414 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
COL11A1-201ENST00000353414 LEPROTO15243 131 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 EFNA2O43921 213 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 IGKV1-5P01602 117 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 hADV29S1A0JD25 119 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 BUB1B-PAK6H3BSN5 160 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 CACNA1EQ15878 2313 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 WISP3O95389 354 aaPredicted RBP8.17□□□□□ -1.1
COL11A1-201ENST00000353414 UCP1P25874 307 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 DUTP33316 252 aaKnown RBP8.17□□□□□ -1.1
COL11A1-201ENST00000353414 TIMP3P35625 211 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
COL11A1-201ENST00000353414 ATRAIDQ6UW56 229 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 PRIMA1Q86XR5 153 aa8.17□□□□□ -1.1
COL11A1-201ENST00000353414 AZU1P20160 251 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 Q6ZQT7 251 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 RALGAPA2Q2PPJ7 1873 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 IGKV1-39P01597 117 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 IGKV1D-39P04432 117 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 C9orf153Q5TBE3 101 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
COL11A1-201ENST00000353414 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
COL11A1-201ENST00000353414 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 IGKV1D-8A0A087WSZ0 117 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 TRBV7-1A0A0A6YYK4 115 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
COL11A1-201ENST00000353414 ZNF581Q9P0T4 197 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms