RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IGHV1-69P01742 117 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 ATP5G3P48201 142 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 CYYR1Q96J86 154 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
SMAD9-201ENST00000350148 CX3CL1P78423 397 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 HSD52Q0P140 79 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 LYPD1Q8N2G4 141 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 OSTCQ9NRP0 149 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 IGKV1-16P04430 117 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 EPDR1Q9UM22 224 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 SCO2A0A1W2PP80 73 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 SMAD7O15105 426 aaKnown RBP9.83□□□□□ -0.84
SMAD9-201ENST00000350148 SERF1AO75920 110 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 C9JCJ5 164 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 TOMM40O96008 361 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 IGHV2-5P01817 119 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 ANOS1P23352 680 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 SAA4P35542 130 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 PLA2G5P39877 138 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 C10orf55Q5SWW7 151 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 C10orf91Q5T1B1 145 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
SMAD9-201ENST00000350148 ZNF479Q96JC4 524 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 J3QKU1 62 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 ZNF324O75467 553 aaPredicted RBP9.82□□□□□ -0.84
SMAD9-201ENST00000350148 CD33P20138 364 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 RPP25LQ8N5L8 163 aaKnown RBP9.82□□□□□ -0.84
SMAD9-201ENST00000350148 OR11H6Q8NGC7 330 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 ITLN2Q8WWU7 325 aaPredicted RBP9.82□□□□□ -0.84
SMAD9-201ENST00000350148 DNAH12Q6ZR08 3092 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 RPL23P62829 140 aaKnown RBP9.82□□□□□ -0.84
SMAD9-201ENST00000350148 ZNF414Q96IQ9 312 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 WFDC3Q8IUB2 231 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
SMAD9-201ENST00000350148 OR11H12B2RN74 326 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 PRSS2P07478 247 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 OR11H1Q8NG94 326 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 OR11H2Q8NH07 326 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 PAX1P15863 534 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE5Q13069 117 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE6Q13070 117 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 DUX4L9Q6RFH8 374 aaPredicted RBP9.81□□□□□ -0.84
SMAD9-201ENST00000350148 AZU1P20160 251 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 ZNF134P52741 427 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 PAX8Q06710 450 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 RTTNQ86VV8 2226 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 A0A1W2PPI3 338 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 LGALS3P17931 250 aaKnown RBP9.81□□□□□ -0.84
SMAD9-201ENST00000350148 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 CTSZQ9UBR2 303 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 TSSC4Q9Y5U2 329 aaPredicted RBP9.81□□□□□ -0.84
SMAD9-201ENST00000350148 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
SMAD9-201ENST00000350148 OTOGLQ3ZCN5 2332 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 CACNA1DQ01668 2161 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 MYO7BQ6PIF6 2116 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 LY6HO94772 140 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 DNAL4O96015 105 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
SMAD9-201ENST00000350148 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 FER1L6-AS1Q8NA97 138 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 B5MCH6 92 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 ASCL2Q99929 193 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
SMAD9-201ENST00000350148 H3BUX3 64 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 CD24P25063 80 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 CMC4P56277 68 aaPredicted RBP9.8□□□□□ -0.84
SMAD9-201ENST00000350148 TCF23Q7RTU1 214 aa9.8□□□□□ -0.84
SMAD9-201ENST00000350148 SEPSECSQ9HD40 501 aaKnown RBP9.8□□□□□ -0.84
SMAD9-201ENST00000350148 IGKV3-7A0A075B6H7 116 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 MRAPQ8TCY5 172 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 NAA38Q9BRA0 125 aaKnown RBP9.79□□□□□ -0.84
SMAD9-201ENST00000350148 CSTL1Q9H114 145 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 TPRP12270 2363 aaKnown RBP9.79□□□□□ -0.84
SMAD9-201ENST00000350148 HBBP68871 147 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 DUX5Q96PT3 197 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 PRB3Q04118 309 aaPredicted RBP9.79□□□□□ -0.84
SMAD9-201ENST00000350148 ADAMTSL5Q6ZMM2 481 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 SPTBN2O15020 2390 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 OVOL1O14753 267 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 NDUFB8O95169 186 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 C15orf32Q32M92 178 aa9.79□□□□□ -0.84
SMAD9-201ENST00000350148 SLC25A39Q9BZJ4 359 aaPredicted RBP9.79□□□□□ -0.84
SMAD9-201ENST00000350148 GPX1P07203 203 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 IZUMO1RA6ND01 250 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GZMBP10144 247 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE7O76087 117 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms