RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 KIR3DL3Q8N743 410 aa12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 RIF1Q5UIP0 2472 aaKnown RBP12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 ZFHX2Q9C0A1 2572 aaPredicted RBP12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 WI2-2373I1.2A0A1W2PRP0 233 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 LINC00614P0C842 121 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 C3orf79P0CE67 100 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 GRNP28799 593 aaKnown RBP12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 PRB3Q04118 309 aaPredicted RBP12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 C11orf71Q6IPW1 123 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 LHFPL4Q7Z7J7 247 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 KLHDC1Q8N7A1 406 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 ZNF479Q96JC4 524 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 CFAP47Q6ZTR5 3102 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 VWC2LB2RUY7 222 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 COL8A1P27658 744 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 MFAP4P55083 255 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 LDLRAD2Q5SZI1 272 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 LINC00322Q6ZN03 302 aaPredicted RBP12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 ZNF491Q8N8L2 437 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 CLEC5AQ9NY25 188 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 ACACAQ13085 2346 aa12.23□□□□□ -0.45
TNFSF13-202ENST00000349228 C20orf202A1L168 122 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 HAX1O00165 279 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 SCGB2A1O75556 95 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 NTF3P20783 257 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 CTRLP40313 264 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 PDE6HQ13956 83 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 CHCHD1Q96BP2 118 aaKnown RBP12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 ROS1P08922 2347 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 DMXL1Q9Y485 3027 aa12.22□□□□□ -0.45
TNFSF13-202ENST00000349228 A0A1B0GW15 77 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 H0Y8G0 127 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 OR2D3Q8NGH3 330 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 NDFIP1Q9BT67 221 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 THYN1Q9P016 225 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 RNF114Q9Y508 228 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 ANKRD11Q6UB99 2663 aaPredicted RBP12.21□□□□□ -0.45
TNFSF13-202ENST00000349228 H3BTX0 84 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 M0R2Z0 102 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 S100A7P31151 101 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 PRNTQ86SH4 94 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 FAM19A2Q8N3H0 131 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 IGFBPL1Q8WX77 278 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 PGLYRP4Q96LB8 373 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 UQCR10Q9UDW1 63 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 AKAP13Q12802 2813 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 MALRD1Q5VYJ5 2156 aa12.21□□□□□ -0.46
TNFSF13-202ENST00000349228 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 GNG7O60262 68 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 HLA-DRB1P01911 266 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 EBI3Q14213 229 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 SPATA45Q537H7 98 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 ASPHD1Q5U4P2 390 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 Q6AWC8 147 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 SIGLEC15Q6ZMC9 328 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 FAM181BA6NEQ2 426 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 IL4P05112 153 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 HES1Q14469 280 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 DTX2Q86UW9 622 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
TNFSF13-202ENST00000349228 APC2O95996 2303 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 CHEK1O14757 476 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 MRPS12O15235 138 aaKnown RBP12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 PSG3Q16557 428 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 ARPC1AQ92747 370 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 PSG8Q9UQ74 426 aa12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 MAP1BP46821 2468 aaKnown RBP12.19□□□□□ -0.46
TNFSF13-202ENST00000349228 MGAQ8IWI9 3026 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 A6NNC1 897 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 RIGQ13278 110 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 CIARTQ8N365 385 aaPredicted RBP12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 Q8N6K4 173 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 GATD1Q8NB37 220 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 FANCD2OSQ96PS1 177 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 AAMDCQ9H7C9 122 aa12.18□□□□□ -0.46
TNFSF13-202ENST00000349228 C1RLQ9NZP8 487 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms