RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FOXE3Q13461 319 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 RRN3P1Q2M238 152 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 C10orf113Q5VZT2 155 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 PMS2CLQ68D20 193 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 SH2D6Q7Z4S9 175 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-201ENST00000343524 OR1L8Q8NGR8 309 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 F11RQ9Y624 299 aaKnown RBP6.56□□□□□ -1.36
ATG4A-201ENST00000343524 PTPRBP23467 1997 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 PTPRQQ9UMZ3 2332 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 DOPEY2Q9Y3R5 2298 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 CELSR3Q9NYQ7 3312 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 CREBBPQ92793 2442 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 MYCNOSP40205 109 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 HERV-K104P63124 156 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 PRCDQ00LT1 54 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 DLX4Q92988 240 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-201ENST00000343524 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 HARBI1Q96MB7 349 aa6.56□□□□□ -1.36
ATG4A-201ENST00000343524 NOTCH2Q04721 2471 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 TRBV6-1A0A0K0K1D8 114 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 J3KRW8 73 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 MRPL33O75394 65 aaKnown RBP6.55□□□□□ -1.36
ATG4A-201ENST00000343524 IGHG4P01861 327 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 CD59P13987 128 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 MPV17P39210 176 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 ZNF138P52744 262 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 POU2AF1Q16633 256 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 IFI27L2Q9H2X8 130 aa6.55□□□□□ -1.36
ATG4A-201ENST00000343524 IGHV1OR21-1A0A087WYE8 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 NPIPB5A8MRT5 1133 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 EVI2AP22794 236 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 RPL32P62910 135 aaKnown RBP6.54□□□□□ -1.36
ATG4A-201ENST00000343524 CD69Q07108 199 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 TWIST1Q15672 202 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ZNF766Q5HY98 468 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 KLF17Q5JT82 389 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ABHD17BQ5VST6 288 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ZNF562Q6V9R5 426 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ACP7Q6ZNF0 438 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 OR10X1Q8NGY0 326 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 TMEM133Q9H2Q1 129 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 TRBV25-1A0A075B6N4 114 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 IGKV3D-15A0A087WSY6 115 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 A0A1W2PPC4 97 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE12JA6NER3 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 K7ERJ3 54 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 TNFRSF13BO14836 293 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-201ENST00000343524 CXCL13O43927 109 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ATP5LO75964 103 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE7O76087 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 MOSP00540 346 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 IGLV3-19P01714 112 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 ACP1P24666 158 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 SSR4P51571 173 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GAGE4Q13068 117 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 CR1LQ2VPA4 569 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 CFAP126Q5VTH2 177 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 LINC00696Q6ZRV3 163 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GGNQ86UU5 652 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 Q8TCH9 128 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 FXYD5Q96DB9 178 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 MDFIQ99750 246 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 GNG12Q9UBI6 72 aa6.54□□□□□ -1.36
ATG4A-201ENST00000343524 A0A096LNJ9 63 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 B5MCH6 92 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 LMO7DNF2Z398 122 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 SRD5A1P18405 259 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 ASIPP42127 132 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 SUB1P53999 127 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATG4A-201ENST00000343524 XGP55808 180 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 Q86TA4 180 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 TMEM178AQ8NBL3 297 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-201ENST00000343524 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 B4GALT7Q9UBV7 327 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 UFC1Q9Y3C8 167 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 U3KQK5 164 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
ATG4A-201ENST00000343524 EML6Q6ZMW3 1958 aa6.52□□□□□ -1.36
ATG4A-201ENST00000343524 IGKV1OR2-108A0A075B7D4 117 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 TRAV5A0A0B4J249 113 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 PGPA6NDG6 321 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 PSPNO60542 156 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 NDUFS7O75251 213 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 CNIH1O95406 144 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms