RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SYNJ2BPP57105 145 aa15.77■□□□□ 0.11
SEMA6C-201ENST00000341697 OR10J3Q5JRS4 329 aa15.77■□□□□ 0.11
SEMA6C-201ENST00000341697 SUMO2P61956 95 aaKnown RBP15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 C3orf56Q8N813 242 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 TSKUQ8WUA8 353 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 ZNF414Q96IQ9 312 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 C18orf15Q96N68 181 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 CTSZQ9UBR2 303 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 PRB4P10163 310 aaPredicted RBP15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 ZNF256Q9Y2P7 627 aaPredicted RBP15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 A0A1B0GW64 132 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 SCGB3A1Q96QR1 104 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 CREBBPQ92793 2442 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 TMEM238LA0A1B0GVL6 79 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 A6NJY4 79 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 G3V318 75 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 NDUFB8O95169 186 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 CIRBPQ14011 172 aaKnown RBP15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 ATRAIDQ6UW56 229 aa15.76■□□□□ 0.11
SEMA6C-201ENST00000341697 LINC00477Q96M19 166 aa15.75■□□□□ 0.11
SEMA6C-201ENST00000341697 LCN12Q6JVE5 192 aa15.75■□□□□ 0.11
SEMA6C-201ENST00000341697 SHANK2-AS3Q9BTD1 123 aa15.75■□□□□ 0.11
SEMA6C-201ENST00000341697 FCN3O75636 299 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 Q8NA96 180 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 NUDT10Q8NFP7 164 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 NUDT11Q96G61 164 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 RAB37Q96AX2 223 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 ST20Q9HBF5 79 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 OR11H12B2RN74 326 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 IGKV1-39P01597 117 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 IGKV1D-39P04432 117 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 LHBP01229 141 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 PRSS2P07478 247 aa15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 YPEL3P61236 119 aaPredicted RBP15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 SSBP4Q9BWG4 385 aaPredicted RBP15.74■□□□□ 0.11
SEMA6C-201ENST00000341697 TRGV4A0A0C4DH28 118 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 ACTL10Q5JWF8 245 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 C2orf88Q9BSF0 95 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 DEFB113Q30KQ7 82 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 PPBPP02775 128 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 DIAPH2-AS1Q14236 149 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 MEIG1Q5JSS6 88 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 C8orf31Q8N9H6 132 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 SRRM4A7MD48 611 aaKnown RBP15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 PLA2G5P39877 138 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 TMEM170BQ5T4T1 132 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 SLC25A34Q6PIV7 304 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 TMEM160Q9NX00 188 aa15.73■□□□□ 0.11
SEMA6C-201ENST00000341697 H3BVH4 76 aa15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 Q6ZSR3 168 aa15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 SPRNQ5BIV9 151 aa15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 TCF23Q7RTU1 214 aa15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 VPS25Q9BRG1 176 aa15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 FGF23Q9GZV9 251 aaPredicted RBP15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 CA1P00915 261 aaPredicted RBP15.72■□□□□ 0.11
SEMA6C-201ENST00000341697 MED13Q9UHV7 2174 aa15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 DAZAP2Q15038 168 aaPredicted RBP15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 COPS9Q8WXC6 57 aa15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 UQCR10Q9UDW1 63 aa15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 ZNF106Q9H2Y7 1883 aaKnown RBP15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 WIPF3A6NGB9 483 aa15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 PET117Q6UWS5 81 aa15.71■□□□□ 0.11
SEMA6C-201ENST00000341697 ZNF25P17030 456 aaPredicted RBP15.71■□□□□ 0.1
SEMA6C-201ENST00000341697 PSG3Q16557 428 aa15.71■□□□□ 0.1
SEMA6C-201ENST00000341697 ALKBH7Q9BT30 221 aaPredicted RBP15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 WISP2O76076 250 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 PDE6HQ13956 83 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 IGFL4Q6B9Z1 124 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 C1QL4Q86Z23 238 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 OR11H1Q8NG94 326 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 OR11H2Q8NH07 326 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 TPSG1Q9NRR2 321 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 LINC01619G3V211 115 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 HIST1H4GQ99525 98 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 DERL1Q9BUN8 251 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 Q71RC1 249 aaPredicted RBP15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 ATP5L2Q7Z4Y8 100 aa15.7■□□□□ 0.1
SEMA6C-201ENST00000341697 LBHQ53QV2 105 aaPredicted RBP15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 LINC01551Q86U37 167 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 ATOH7Q8N100 152 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 NRN1Q9NPD7 142 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 HOXB4P17483 251 aaPredicted RBP15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 Q8TAT8 98 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 C1QTNF4Q9BXJ3 329 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 IGHV4-61A0A0C4DH41 118 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 C12orf54Q6X4T0 127 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 SPOCK3Q9BQ16 436 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 TMEM242Q9NWH2 141 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 RPL35AP18077 110 aaKnown RBP15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 PAX9P55771 341 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 WT1-ASQ06250 92 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 FBXL19-AS1Q494R0 122 aa15.69■□□□□ 0.1
SEMA6C-201ENST00000341697 TMEM170AQ8WVE7 144 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 FOXC2Q99958 501 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 GNB1LQ9BYB4 327 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 TMEM131Q92545 1883 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 TRAV12-3A0A0B4J271 114 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 DNLZQ5SXM8 178 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 RCHY1Q96PM5 261 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms