RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 PRSS46E5RG02 174 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 SPP1P10451 314 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 ZNF90Q03938 601 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 LEMD1Q68G75 181 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 MORN3Q6PF18 240 aaPredicted RBP9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 ZNF546Q86UE3 836 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 FAM24BQ8N5W8 94 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 STOML3Q8TAV4 291 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 PBDC1Q9BVG4 233 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 NMES1Q9C002 83 aa9.8□□□□□ -0.84
SIRPB3P-201ENST00000340424 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 LCE6AA0A183 80 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 ZNF688P0C7X2 276 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 TAS2R30P59541 319 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 CYCSP99999 105 aaKnown RBP9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 UQCC3Q6UW78 93 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 SMIM8Q96KF7 97 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 PSENENQ9NZ42 101 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 DNAH1Q9P2D7 4330 aa9.79□□□□□ -0.84
SIRPB3P-201ENST00000340424 IGKV1OR2-108A0A075B7D4 117 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 FNDC10F2Z333 226 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 FAM229AH3BQW9 127 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 SSSCA1O60232 199 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 JTBO76095 146 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 RLN2P04090 185 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 LYZP61626 148 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 AKR1C1Q04828 323 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 IAH1Q2TAA2 248 aaPredicted RBP9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 BPIFCQ8NFQ6 507 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 RARRES2Q99969 163 aa9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
SIRPB3P-201ENST00000340424 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 NUPR2A6NF83 97 aa9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 H3BP45 60 aa9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 PSMG4Q5JS54 123 aa9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 PPP1R1CQ8WVI7 109 aa9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 PCNPQ8WW12 178 aaKnown RBP9.77□□□□□ -0.85
SIRPB3P-201ENST00000340424 ID1P41134 155 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 PSMB3P49720 205 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 MEOX2P50222 304 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 SELENOTP62341 195 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 S100A7AQ86SG5 101 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 OR11H2Q8NH07 326 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 THAP6Q8TBB0 222 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 GPR82Q96P67 336 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 ARPC5LQ9BPX5 153 aa9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
SIRPB3P-201ENST00000340424 CXorf65A6NEN9 183 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 TEX46H3BTG2 121 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 SCO1O75880 301 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 SCGB1D2O95969 90 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 GALR1P47211 349 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 DLK1P80370 383 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 IL15RAQ13261 267 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 TMEM14EPQ6UXP3 125 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 OR8I2Q8N0Y5 310 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 GGACTQ9BVM4 153 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 GSKIPQ9P0R6 139 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 RNF24Q9Y225 148 aa9.75□□□□□ -0.85
SIRPB3P-201ENST00000340424 SMCO3A2RU48 225 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 PMS2P5A8MQ11 134 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 ISLRO14498 428 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 HLA-DRB4P13762 266 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 PAX9P55771 341 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 SMUG1Q53HV7 270 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 SPATA31B1PQ5VZV4 182 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 INO80EQ8NBZ0 244 aaPredicted RBP9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 AQP10Q96PS8 301 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 MBD2Q9UBB5 411 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 RCL1Q9Y2P8 373 aaKnown RBP9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 HLA-DRB4X5D2U9 266 aa9.74□□□□□ -0.85
SIRPB3P-201ENST00000340424 ZNF98A6NK75 572 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 K7EPK0 472 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 MBPP02686 304 aaPredicted RBP9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 METTL15P1P0C7V9 234 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 TPT1P13693 172 aaKnown RBP9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 MIFP14174 115 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 PLP1P60201 277 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 CYP2G1PQ6ZSU1 146 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 OR1B1Q8NGR6 318 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms