RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
RET-201ENST00000340058 ERASQ7Z444 233 aa11.85□□□□□ -0.51
RET-201ENST00000340058 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
RET-201ENST00000340058 PVRIGQ6DKI7 326 aa11.85□□□□□ -0.51
RET-201ENST00000340058 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
RET-201ENST00000340058 CFHR2P36980 270 aa11.84□□□□□ -0.51
RET-201ENST00000340058 ZNF138P52744 262 aa11.84□□□□□ -0.51
RET-201ENST00000340058 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
RET-201ENST00000340058 NRN1Q9NPD7 142 aa11.84□□□□□ -0.51
RET-201ENST00000340058 TANC2Q9HCD6 1990 aa11.84□□□□□ -0.51
RET-201ENST00000340058 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
RET-201ENST00000340058 IZUMO1RA6ND01 250 aa11.84□□□□□ -0.51
RET-201ENST00000340058 C5orf52A6NGY3 159 aa11.84□□□□□ -0.51
RET-201ENST00000340058 SCGB1C2P0DMR2 95 aa11.84□□□□□ -0.51
RET-201ENST00000340058 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
RET-201ENST00000340058 RAB37Q96AX2 223 aa11.84□□□□□ -0.51
RET-201ENST00000340058 A0A1B0GV90 55 aa11.84□□□□□ -0.51
RET-201ENST00000340058 NPFFO15130 113 aa11.84□□□□□ -0.51
RET-201ENST00000340058 PRB1P04280 392 aa11.84□□□□□ -0.51
RET-201ENST00000340058 FOLR2P14207 255 aa11.84□□□□□ -0.51
RET-201ENST00000340058 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
RET-201ENST00000340058 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
RET-201ENST00000340058 OSTCQ9NRP0 149 aa11.84□□□□□ -0.51
RET-201ENST00000340058 SHISA9B4DS77 424 aa11.84□□□□□ -0.51
RET-201ENST00000340058 AMBPP02760 352 aa11.84□□□□□ -0.51
RET-201ENST00000340058 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
RET-201ENST00000340058 ITLN2Q8WWU7 325 aaPredicted RBP11.84□□□□□ -0.51
RET-201ENST00000340058 ZNF56Q15929 161 aa11.83□□□□□ -0.52
RET-201ENST00000340058 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
RET-201ENST00000340058 MCRIP2Q9BUT9 160 aaKnown RBP11.83□□□□□ -0.52
RET-201ENST00000340058 YAE1D1Q9NRH1 226 aa11.83□□□□□ -0.52
RET-201ENST00000340058 NCR2O95944 276 aa11.83□□□□□ -0.52
RET-201ENST00000340058 EVI2AP22794 236 aa11.83□□□□□ -0.52
RET-201ENST00000340058 KRTAP27-1Q3LI81 207 aa11.83□□□□□ -0.52
RET-201ENST00000340058 CRIP3Q6Q6R5 217 aa11.83□□□□□ -0.52
RET-201ENST00000340058 ARL6IP6Q8N6S5 226 aa11.83□□□□□ -0.52
RET-201ENST00000340058 WDFY4Q6ZS81 3184 aa11.83□□□□□ -0.52
RET-201ENST00000340058 TCRAP04437 139 aa11.83□□□□□ -0.52
RET-201ENST00000340058 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
RET-201ENST00000340058 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
RET-201ENST00000340058 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
RET-201ENST00000340058 A0A0G2JLM5 398 aa11.82□□□□□ -0.52
RET-201ENST00000340058 RAB9AP51151 201 aa11.82□□□□□ -0.52
RET-201ENST00000340058 PAX8Q06710 450 aa11.82□□□□□ -0.52
RET-201ENST00000340058 HIST3H2BBQ8N257 126 aa11.82□□□□□ -0.52
RET-201ENST00000340058 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
RET-201ENST00000340058 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
RET-201ENST00000340058 NDUFB8O95169 186 aa11.82□□□□□ -0.52
RET-201ENST00000340058 Q8TCH9 128 aa11.82□□□□□ -0.52
RET-201ENST00000340058 SNRPD3P62318 126 aaKnown RBP11.82□□□□□ -0.52
RET-201ENST00000340058 LCN12Q6JVE5 192 aa11.82□□□□□ -0.52
RET-201ENST00000340058 CEACAM4O75871 244 aa11.81□□□□□ -0.52
RET-201ENST00000340058 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
RET-201ENST00000340058 FNDC4Q9H6D8 234 aaPredicted RBP11.81□□□□□ -0.52
RET-201ENST00000340058 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
RET-201ENST00000340058 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
RET-201ENST00000340058 NRGNQ92686 78 aa11.81□□□□□ -0.52
RET-201ENST00000340058 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
RET-201ENST00000340058 FABP5P3A8MUU1 101 aa11.8□□□□□ -0.52
RET-201ENST00000340058 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
RET-201ENST00000340058 Q6ZSR3 168 aa11.8□□□□□ -0.52
RET-201ENST00000340058 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
RET-201ENST00000340058 TRAV8-6A0A0B4J262 113 aa11.8□□□□□ -0.52
RET-201ENST00000340058 GGTLC3B5MD39 225 aa11.8□□□□□ -0.52
RET-201ENST00000340058 TEX36Q5VZQ5 186 aa11.8□□□□□ -0.52
RET-201ENST00000340058 DMRTC2Q8IXT2 367 aaPredicted RBP11.8□□□□□ -0.52
RET-201ENST00000340058 C5orf30Q96GV9 206 aa11.8□□□□□ -0.52
RET-201ENST00000340058 RITA1Q96K30 269 aa11.8□□□□□ -0.52
RET-201ENST00000340058 TRGV9Q99603 122 aa11.8□□□□□ -0.52
RET-201ENST00000340058 TMEM70Q9BUB7 260 aa11.8□□□□□ -0.52
RET-201ENST00000340058 CDC42EP3Q9UKI2 254 aa11.8□□□□□ -0.52
RET-201ENST00000340058 MUC22E2RYF6 1773 aaPredicted RBP11.8□□□□□ -0.52
RET-201ENST00000340058 ACANP16112 2415 aa11.8□□□□□ -0.52
RET-201ENST00000340058 A0A1B0GW64 132 aa11.8□□□□□ -0.52
RET-201ENST00000340058 UBE2CO00762 179 aa11.8□□□□□ -0.52
RET-201ENST00000340058 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
RET-201ENST00000340058 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
RET-201ENST00000340058 REC114Q7Z4M0 266 aa11.8□□□□□ -0.52
RET-201ENST00000340058 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
RET-201ENST00000340058 GCSHP23434 173 aa11.79□□□□□ -0.52
RET-201ENST00000340058 Q8NA96 180 aa11.79□□□□□ -0.52
RET-201ENST00000340058 EMP1P54849 157 aa11.79□□□□□ -0.52
RET-201ENST00000340058 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
RET-201ENST00000340058 ZNF833PQ6ZTB9 187 aa11.79□□□□□ -0.52
RET-201ENST00000340058 H7C2G1 150 aa11.79□□□□□ -0.52
RET-201ENST00000340058 TCF21O43680 179 aa11.79□□□□□ -0.52
RET-201ENST00000340058 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
RET-201ENST00000340058 UQCR10Q9UDW1 63 aa11.79□□□□□ -0.52
RET-201ENST00000340058 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
RET-201ENST00000340058 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
RET-201ENST00000340058 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
RET-201ENST00000340058 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
RET-201ENST00000340058 H3BVH4 76 aa11.78□□□□□ -0.52
RET-201ENST00000340058 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
RET-201ENST00000340058 M0R1W7 72 aa11.78□□□□□ -0.52
RET-201ENST00000340058 ERCC8Q13216 396 aa11.78□□□□□ -0.52
RET-201ENST00000340058 OR1N2Q8NGR9 330 aa11.78□□□□□ -0.52
RET-201ENST00000340058 CD7P09564 240 aa11.77□□□□□ -0.52
RET-201ENST00000340058 FOSL1P15407 271 aa11.77□□□□□ -0.52
RET-201ENST00000340058 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms