RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 IGLV1-36A0A0B4J1U3 117 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 GAGE12HA6NDE8 117 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 RPL15P61313 204 aaKnown RBP10.67□□□□□ -0.7
USP47-202ENST00000339865 ARID2Q68CP9 1835 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 C12orf77C9JDV5 145 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 APOBEC3AP31941 199 aaPredicted RBP10.67□□□□□ -0.7
USP47-202ENST00000339865 RNF126Q9BV68 326 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 PILRAQ9UKJ1 303 aa10.67□□□□□ -0.7
USP47-202ENST00000339865 F8W1H4 67 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 GREM1O60565 184 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 BHLHA9Q7RTU4 235 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 TRAV40A0A0B4J280 105 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 TMEM14DPA8MWL7 114 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 C3orf79P0CE67 100 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 SIGLEC12Q96PQ1 595 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 DLEC1Q9Y238 1755 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 PAX8Q06710 450 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 ATP1A1-AS1Q5TC04 95 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 LYZL1Q6UWQ5 148 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 SLC25A48Q6ZT89 311 aaKnown RBP10.66□□□□□ -0.7
USP47-202ENST00000339865 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 SLAQ13239 276 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 CD200R1LQ6Q8B3 271 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 BRK1Q8WUW1 75 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 TRBV5-3A0A0A0MS03 114 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 CISD3P0C7P0 127 aa10.66□□□□□ -0.7
USP47-202ENST00000339865 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
USP47-202ENST00000339865 SP7Q8TDD2 431 aaPredicted RBP10.66□□□□□ -0.7
USP47-202ENST00000339865 PEBP1P30086 187 aaKnown RBP10.65□□□□□ -0.7
USP47-202ENST00000339865 C15orf61A6NNL5 157 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 NBR2O15453 112 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 PVRIGQ6DKI7 326 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 PKD1L3Q7Z443 1732 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 A0A1W2PR77 199 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 SBF1O95248 1867 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
USP47-202ENST00000339865 CXorf51AA0A1B0GTR3 108 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
USP47-202ENST00000339865 PTPN13Q12923 2485 aa10.65□□□□□ -0.71
USP47-202ENST00000339865 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.71
USP47-202ENST00000339865 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.71
USP47-202ENST00000339865 ZNF561-AS1K7EIQ3 104 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 K7EP13 123 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 FCN3O75636 299 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 C8orf31Q8N9H6 132 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 SAA2-SAA4A0A096LPE2 208 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 SAA2P0DJI9 122 aaPredicted RBP10.64□□□□□ -0.71
USP47-202ENST00000339865 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 FOXS1O43638 330 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 C14orf132Q9NPU4 83 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 NPSP0C0P6 89 aa10.64□□□□□ -0.71
USP47-202ENST00000339865 FOXG1P55316 489 aaPredicted RBP10.64□□□□□ -0.71
USP47-202ENST00000339865 A0A087WWL8 130 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 TRAV12-2A0A075B6T6 113 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 C9orf118A6NHY6 69 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 A8MWP6 167 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 GAS1P54826 345 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 UTF1Q5T230 341 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 C18orf12Q96KH6 178 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 TICRRQ7Z2Z1 1910 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 TAL2Q16559 108 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 GZMMP51124 257 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 KLRD1Q13241 179 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 STRCQ7RTU9 1775 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 RBBP6Q7Z6E9 1792 aaKnown RBP10.63□□□□□ -0.71
USP47-202ENST00000339865 H3BMG7 143 aa10.63□□□□□ -0.71
USP47-202ENST00000339865 CRLF1O75462 422 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 A0A0G2JK05 382 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 SHISA9B4DS77 424 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 IL18BPO95998 194 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 IGHG2P01859 326 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 SPANXDQ9BXN6 97 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 OVOL1O14753 267 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 FAM216BQ8N7L0 139 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 TM2D1Q9BX74 207 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 PLAC1Q9HBJ0 212 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 TRBV24-1A0A075B6N3 115 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 COLCA2A8K830 154 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 LY6G5BQ8NDX9 201 aa10.62□□□□□ -0.71
USP47-202ENST00000339865 SLC25A39Q9BZJ4 359 aaPredicted RBP10.62□□□□□ -0.71
USP47-202ENST00000339865 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 LINC01465Q8N7H1 131 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 CDCP2Q5VXM1 449 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 SPTSSBQ8NFR3 76 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 SP9P0CG40 484 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 UPK2O00526 184 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms