RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 F2Z2F3 143 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 ELOBQ15370 118 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 BCL6BQ8N143 479 aaPredicted RBP8.05□□□□□ -1.12
USP54-201ENST00000339859 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 CRPP02741 224 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 Q1RN00 199 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 TMEM95Q3KNT9 176 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 Q6ZRM9 215 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 C22orf34Q6ZV56 151 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 REC114Q7Z4M0 266 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 MBD3L1Q8WWY6 194 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 CA1P00915 261 aaPredicted RBP8.05□□□□□ -1.12
USP54-201ENST00000339859 RNF224P0DH78 156 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 C2orf88Q9BSF0 95 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 IGHV7-81A0A0B4J1V7 117 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 SRRM4A7MD48 611 aaKnown RBP8.05□□□□□ -1.12
USP54-201ENST00000339859 TMEM183BQ1AE95 376 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 NDUFA11Q86Y39 141 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 TMEM183AQ8IXX5 376 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 LY6G5BQ8NDX9 201 aa8.05□□□□□ -1.12
USP54-201ENST00000339859 YLPM1P49750 1951 aaKnown RBP8.04□□□□□ -1.12
USP54-201ENST00000339859 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 VGLL1Q99990 258 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 IL36BQ9NZH7 164 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 TRGV1A0A0A0MS02 117 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 EXOC3-AS1Q8N2X6 119 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 Q8N9W7 124 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 CXorf65A6NEN9 183 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 ZNF114Q8NC26 417 aa8.04□□□□□ -1.12
USP54-201ENST00000339859 MRPL18Q9H0U6 180 aaKnown RBP8.04□□□□□ -1.12
USP54-201ENST00000339859 ALPK2Q86TB3 2170 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 SRSF4Q08170 494 aaKnown RBP8.03□□□□□ -1.12
USP54-201ENST00000339859 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 MEGF9Q9H1U4 602 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 AP5S1Q9NUS5 200 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 OTOGLQ3ZCN5 2332 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 BLCAPP62952 87 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 ODF3BA8MYP8 253 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 PRSS2P07478 247 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 LYL1P12980 280 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 MLANAQ16655 118 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 THAP8Q8NA92 274 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 H3BRN7 92 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 TCRAP04437 139 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 VSIRQ9H7M9 311 aa8.03□□□□□ -1.12
USP54-201ENST00000339859 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
USP54-201ENST00000339859 IGLV1-47P01700 117 aa8.02□□□□□ -1.12
USP54-201ENST00000339859 IQCJQ1A5X6 159 aa8.02□□□□□ -1.12
USP54-201ENST00000339859 IZUMO1RA6ND01 250 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 SCO1O75880 301 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 SRP19P09132 144 aaKnown RBP8.02□□□□□ -1.13
USP54-201ENST00000339859 SEPSECSQ9HD40 501 aaKnown RBP8.02□□□□□ -1.13
USP54-201ENST00000339859 TNRC6BQ9UPQ9 1833 aaKnown RBP8.02□□□□□ -1.13
USP54-201ENST00000339859 IGKV1-39P01597 117 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 IGKV1D-39P04432 117 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 DAD1P61803 113 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 GTF3C1Q12789 2109 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 AGMATQ9BSE5 352 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 IGHG2P01859 326 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
USP54-201ENST00000339859 GP9P14770 177 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 SLURP1P55000 103 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 HSPB9Q9BQS6 159 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 FOLR2P14207 255 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 DEFB136Q30KP8 78 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 MIEN1Q9BRT3 115 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 SMPXQ9UHP9 88 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 ZNF324O75467 553 aaPredicted RBP8.01□□□□□ -1.13
USP54-201ENST00000339859 INSL3P51460 131 aa8.01□□□□□ -1.13
USP54-201ENST00000339859 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
USP54-201ENST00000339859 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
USP54-201ENST00000339859 TMEM14CQ9P0S9 112 aa8□□□□□ -1.13
USP54-201ENST00000339859 NDUFA3O95167 84 aa8□□□□□ -1.13
USP54-201ENST00000339859 CDSNQ15517 529 aa8□□□□□ -1.13
USP54-201ENST00000339859 SPAG8Q99932 426 aaPredicted RBP8□□□□□ -1.13
USP54-201ENST00000339859 OSTCQ9NRP0 149 aa8□□□□□ -1.13
USP54-201ENST00000339859 XCL2Q9UBD3 114 aa8□□□□□ -1.13
USP54-201ENST00000339859 H3BVH4 76 aa8□□□□□ -1.13
USP54-201ENST00000339859 AJUBAQ96IF1 538 aa8□□□□□ -1.13
USP54-201ENST00000339859 ATP6V0BQ99437 205 aa8□□□□□ -1.13
USP54-201ENST00000339859 MED13Q9UHV7 2174 aa8□□□□□ -1.13
USP54-201ENST00000339859 FOXI2Q6ZQN5 318 aa8□□□□□ -1.13
USP54-201ENST00000339859 TMEM75Q8N9X5 138 aa8□□□□□ -1.13
USP54-201ENST00000339859 MRAPQ8TCY5 172 aa8□□□□□ -1.13
USP54-201ENST00000339859 TRAV1-1A0A0B4J248 108 aa8□□□□□ -1.13
USP54-201ENST00000339859 OR10AG1Q8NH19 301 aa8□□□□□ -1.13
USP54-201ENST00000339859 TEX48A0A1B0GUV7 120 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms