RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 LINC01560Q8TB33 94 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 TCTEX1D2Q8WW35 142 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 KIR2DL4Q99706 377 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 FBXL15Q9H469 300 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 C16orf95Q9H693 158 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 CACNG5Q9UF02 275 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 F11RQ9Y624 299 aaKnown RBP3.78□□□□□ -1.8
MSL1-201ENST00000339569 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 WI2-2373I1.2A0A1W2PRP0 233 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 IGLC7A0M8Q6 106 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 B4DSR2 109 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 MYOD1P15172 320 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 TGIF2LYQ8IUE0 185 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 CLDND2Q8NHS1 167 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 TMED6Q8WW62 240 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 TOMM40LQ969M1 308 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 PBDC1Q9BVG4 233 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 FBXO7Q9Y3I1 522 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 RFNGQ9Y644 331 aa3.78□□□□□ -1.8
MSL1-201ENST00000339569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.78□□□□□ -1.81e-6■■■□□ 16.7
MSL1-201ENST00000339569 FN1P02751 2386 aaKnown RBP3.78□□□□□ -1.81
MSL1-201ENST00000339569 C19orf84I3L1E1 186 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 COX6B1P14854 86 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ZFP36P26651 326 aaKnown RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 BRS3P32247 399 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 RPL35P42766 123 aaKnown RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 PEA15Q15121 130 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ACOT6Q3I5F7 207 aaPredicted RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 ODF3L2Q3SX64 289 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 C1orf194Q5T5A4 169 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 SPATA31B1PQ5VZV4 182 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ATRAIDQ6UW56 229 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 GATD1Q8NB37 220 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ZNF256Q9Y2P7 627 aaPredicted RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 OR51B2Q9Y5P1 312 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 WNK2Q9Y3S1 2297 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ATRQ13535 2644 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ZFP92A6NM28 416 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 C9JCJ5 164 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 IGHV1-69P01742 117 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 MYCNOSP40205 109 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 NUTF2P61970 127 aaKnown RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 ERHP84090 104 aaKnown RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 PDE6HQ13956 83 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 TREML4Q6UXN2 200 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 SLC35E3Q7Z769 313 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 C1QL4Q86Z23 238 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 OR10P1Q8NGE3 313 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 CCL19Q99731 98 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 IGLV11-55A0A075B6I3 123 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 M0R1X1 148 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 IFNA1P01562 189 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 CXCL1P09341 107 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 SLC38A11Q08AI6 406 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 RHEBQ15382 184 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 DEFB113Q30KQ7 82 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 RNF212Q495C1 297 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 RNASE11Q8TAA1 199 aaKnown RBP3.77□□□□□ -1.81
MSL1-201ENST00000339569 C14orf144Q96I85 54 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 YPEL4Q96NS1 127 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 MLST8Q9BVC4 326 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 DOK5Q9P104 306 aa3.77□□□□□ -1.81
MSL1-201ENST00000339569 ARFGEF3Q5TH69 2177 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 I3L2K1 104 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 PDE6DO43924 150 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 LINC00869P0C866 280 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 SAA1P0DJI8 122 aaPredicted RBP3.76□□□□□ -1.81
MSL1-201ENST00000339569 CCL8P80075 99 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 DEFA6Q01524 100 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 HAGHQ16775 308 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 DEFB108BQ8NET1 73 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 SGMS2Q8NHU3 365 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 FAM168AQ92567 244 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 USMG5Q96IX5 58 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 MRPL20Q9BYC9 149 aaKnown RBP3.76□□□□□ -1.81
MSL1-201ENST00000339569 PARP12Q9H0J9 701 aaKnown RBP3.76□□□□□ -1.81
MSL1-201ENST00000339569 HEATR1Q9H583 2144 aaKnown RBP3.76□□□□□ -1.81
MSL1-201ENST00000339569 TRGV11A0A075B6L2 103 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 FXYD6-FXYD2A0A087WZ82 144 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 A0A1W2PRE2 83 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 TSPAN15O95858 294 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 GCGP01275 180 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 IGLV1-40P01703 118 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 NPY1RP25929 384 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 FXYD4P59646 89 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 VMO1Q7Z5L0 202 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 C2orf88Q9BSF0 95 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 C1QTNF6Q9BXI9 259 aa3.76□□□□□ -1.81
MSL1-201ENST00000339569 NPCDR1Q9BY65 106 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms