RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 MGST1P10620 155 aaKnown RBP4.48□□□□□ -1.69
CSDE1-202ENST00000339438 CCL2P13500 99 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 ZNF32P17041 273 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 DUTP33316 252 aaKnown RBP4.48□□□□□ -1.69
CSDE1-202ENST00000339438 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 GGNQ86UU5 652 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 PIFOQ8TCI5 191 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 PRDM14Q9GZV8 571 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 B4GALT7Q9UBV7 327 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 ZNF146Q15072 292 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 TIGITQ495A1 244 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 CNEP1R1Q8N9A8 125 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 GATD1Q8NB37 220 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 UBALD1Q8TB05 177 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 DUSP13Q9UII6 198 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 DSCAML1Q8TD84 2053 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 C19orf71A6NCJ1 209 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 ZNF785A8K8V0 405 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 UCNP55089 124 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 LOXL1Q08397 574 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-202ENST00000339438 Q6ZUT4 128 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 WDR31Q8NA23 367 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 OR4X2Q8NGF9 303 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 FAM173AQ9BQD7 235 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 OR2H1Q9GZK4 316 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 KCNS2Q9ULS6 477 aa4.48□□□□□ -1.69
CSDE1-202ENST00000339438 A0A087WX48 190 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 KBTBD11-OT1A0A1B0GTJ5 212 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 APOA2P02652 100 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 CAMPP49913 170 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 RPL32P62910 135 aaKnown RBP4.47□□□□□ -1.69
CSDE1-202ENST00000339438 PSG5Q15238 335 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 MTURNQ8N3F0 131 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
CSDE1-202ENST00000339438 IGKV2D-26A0A0A0MRZ7 120 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 A1L4Q6 167 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 H3BMG7 143 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 LTAP01374 205 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 CEBPDP49716 269 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-202ENST00000339438 HBBP68871 147 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 AESQ08117 197 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 KLRD1Q13241 179 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 DIAPH2-AS1Q14236 149 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 C22orf34Q6ZV56 151 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 ZNF502Q8TBZ5 544 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 CITED1Q99966 193 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 SLC25A2Q9BXI2 301 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 LINC01548A6NM66 108 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 IGLL5B9A064 214 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 PRRG2O14669 202 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 FOXI1Q12951 378 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 FAM162BQ5T6X4 162 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 Q6AWC8 147 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 AAED1Q7RTV5 226 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 OSR1Q8TAX0 266 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-202ENST00000339438 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
CSDE1-202ENST00000339438 TRAV3A0A0B4J244 114 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 IGHV3-64DA0A0J9YX35 117 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 WI2-2373I1.2A0A1W2PRP0 233 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 TCRBV4S1A1TA0A5B7 111 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 NPIPB6E9PJ23 425 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 KIR2DL2P43627 348 aaPredicted RBP4.46□□□□□ -1.69
CSDE1-202ENST00000339438 FOXG1P55316 489 aaPredicted RBP4.46□□□□□ -1.69
CSDE1-202ENST00000339438 ERVK11-1P61568 191 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 GAGE5Q13069 117 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 GAGE6Q13070 117 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 Q71RC1 249 aaPredicted RBP4.46□□□□□ -1.69
CSDE1-202ENST00000339438 ZNF329Q86UD4 541 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 ZBTB34Q8NCN2 500 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 AP1S3Q96PC3 154 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 ZMAT4Q9H898 229 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 GCM1Q9NP62 436 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 HIF1ANQ9NWT6 349 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 TRAPPC2LQ9UL33 140 aa4.46□□□□□ -1.69
CSDE1-202ENST00000339438 MAP1AP78559 2803 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-202ENST00000339438 A0A1W2PPR1 153 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 RBP4P02753 201 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 SMIM13P0DJ93 91 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 TMEM178AQ8NBL3 297 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 CARD19Q96LW7 228 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 TMEM167BQ9NRX6 74 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 KLF12Q9Y4X4 402 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 COL7A1Q02388 2944 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 TRGV5A0A0B4J1U4 118 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF503-AS2A6NEH8 195 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 FBLL1A6NHQ2 334 aaKnown RBP4.46□□□□□ -1.7
CSDE1-202ENST00000339438 K7EMI3 77 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
CSDE1-202ENST00000339438 FABP6P51161 128 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 RTL8BQ17RB0 113 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 WDR86Q86TI4 376 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 ZADH2Q8N4Q0 377 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 ITLN1Q8WWA0 313 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms