RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 OR4F4Q96R69 305 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 TMEM213A2RRL7 107 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 HMGB3O15347 200 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 ZNF207O43670 478 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 LEMD1Q68G75 181 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 HIST2H2BDQ6DRA6 164 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 IL34Q6ZMJ4 242 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 PCNPQ8WW12 178 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 DUX3Q96PT4 197 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 PAXXQ9BUH6 204 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 ELOVL1Q9BW60 279 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 TMEM167BQ9NRX6 74 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 TRAV5A0A0B4J249 113 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 M0QZ24 198 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 CD5P06127 495 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 GP9P14770 177 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 GCHFRP30047 84 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 UBE2L3P68036 154 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 IQCF2Q8IXL9 164 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
NIPAL3-202ENST00000339255 IFNA1P01562 189 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 PF4P02776 101 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 TAGLN2P37802 199 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 GALR1P47211 349 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 MEOX2P50222 304 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 C12orf54Q6X4T0 127 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 DLX4Q92988 240 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
NIPAL3-202ENST00000339255 A0A1B0GV50 99 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 HELTA6NFD8 242 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 C2orf70A6NJV1 201 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 CBLN1P23435 193 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 GUK1Q16774 197 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 SHISA2Q6UWI4 295 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 ZNF503Q96F45 646 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
NIPAL3-202ENST00000339255 OVOL1O14753 267 aa11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 CHEK1O14757 476 aa11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 EIF3GO75821 320 aaKnown RBP eCLIP11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 LURAP1LQ8IV03 231 aa11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 SUN5Q8TC36 379 aa11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 GLMPQ8WWB7 406 aa11.05□□□□□ -0.64
NIPAL3-202ENST00000339255 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 MRPS12O15235 138 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 OR10J4P0C629 311 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 PYYP10082 97 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 FOLR2P14207 255 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 ATF4P18848 351 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 PDE6HQ13956 83 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 NDUFA5Q16718 116 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 FXYD5Q96DB9 178 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 SIGLEC8Q9NYZ4 499 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 A0A087X0K7 114 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 NBEAP1P0C6P0 100 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 CCL20P78556 96 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 GNG13Q9P2W3 67 aa11.04□□□□□ -0.64
NIPAL3-202ENST00000339255 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 ZNF253O75346 499 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 BCL2P10415 239 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 SAMD13Q5VXD3 122 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 NKX6-2Q9C056 277 aaPredicted RBP11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
NIPAL3-202ENST00000339255 A0A1W2PRE2 83 aa11.02□□□□□ -0.64
NIPAL3-202ENST00000339255 RAB19A4D1S5 217 aa11.02□□□□□ -0.64
NIPAL3-202ENST00000339255 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.64
NIPAL3-202ENST00000339255 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.64
NIPAL3-202ENST00000339255 TRBV19A0A075B6N1 114 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 H3BQ15 152 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 CSN3P07498 182 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 ZNF586Q9NXT0 402 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 TCF24Q7RTU0 167 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
NIPAL3-202ENST00000339255 SLC50A1Q9BRV3 221 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms