RNA–Protein interactions for RNA: ENST00000336553.10

FGFR2-201, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-201ENST00000336553 SOX21Q9Y651 276 aaPredicted RBP16.87■□□□□ 0.29
FGFR2-201ENST00000336553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.86■□□□□ 0.29
FGFR2-201ENST00000336553 SIAH2O43255 324 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 LINC00614P0C842 121 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 PRB4P10163 310 aaPredicted RBP16.86■□□□□ 0.29
FGFR2-201ENST00000336553 FAM120AOSQ5T036 256 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 DMRTA1Q5VZB9 504 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 SRSF12Q8WXF0 261 aaKnown RBP16.86■□□□□ 0.29
FGFR2-201ENST00000336553 LINC00173Q6ZV60 143 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 RELNP78509 3460 aa16.86■□□□□ 0.29
FGFR2-201ENST00000336553 GRNP28799 593 aaKnown RBP16.85■□□□□ 0.29
FGFR2-201ENST00000336553 PLGLAQ15195 96 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 LINC01560Q8TB33 94 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 RASL11BQ9BPW5 248 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 GFRA4Q9GZZ7 299 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 MRPS16Q9Y3D3 137 aaKnown RBP16.85■□□□□ 0.29
FGFR2-201ENST00000336553 IGHV1-24A0A0C4DH33 117 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 CHEK1O14757 476 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 FAM162BQ5T6X4 162 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 RPEQ96AT9 228 aa16.85■□□□□ 0.29
FGFR2-201ENST00000336553 I3L2K1 104 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 RBM14Q96PK6 669 aaKnown RBP16.84■□□□□ 0.29
FGFR2-201ENST00000336553 FAM90A27PA6NNH2 459 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 IGLV2-11P01706 119 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 APOBEC3AP31941 199 aaPredicted RBP16.84■□□□□ 0.29
FGFR2-201ENST00000336553 ASCL2Q99929 193 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 UCNP55089 124 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 PAX2Q02962 417 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 TMEM14CQ9P0S9 112 aa16.84■□□□□ 0.29
FGFR2-201ENST00000336553 LOC102724200A0A096LPH7 203 aaPredicted RBP16.83■□□□□ 0.28
FGFR2-201ENST00000336553 C20orf202A1L168 122 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 NPIPB6E9PJ23 425 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 CD3EP07766 207 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 ZNF138P52744 262 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 CHCHD1Q96BP2 118 aaKnown RBP16.83■□□□□ 0.28
FGFR2-201ENST00000336553 C17orf77Q96MU5 243 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 OR4C46A6NHA9 309 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 IGKV1-17P01599 117 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 Q6ZVH6 145 aa16.83■□□□□ 0.28
FGFR2-201ENST00000336553 TCF21O43680 179 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 LEPROTL1O95214 131 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 CNIH1O95406 144 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 CDSNQ15517 529 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 PPIAL4CA0A0B4J2A2 164 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 PPIAL4GP0DN37 164 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 TP73-AS1Q9UF72 201 aa16.82■□□□□ 0.28
FGFR2-201ENST00000336553 FAM231BA6NCW3 169 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 SYS1-DBNDD2H3BUS1 97 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 FBXL19-AS1Q494R0 122 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 B9A039 149 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 UNQ5815/PRO19632Q6UWF5 114 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 OR4F17Q8NGA8 305 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 NDFIP1Q9BT67 221 aa16.81■□□□□ 0.28
FGFR2-201ENST00000336553 CCL21O00585 134 aa16.8■□□□□ 0.28
FGFR2-201ENST00000336553 ZC2HC1AQ96GY0 325 aa16.8■□□□□ 0.28
FGFR2-201ENST00000336553 ZNF785A8K8V0 405 aa16.8■□□□□ 0.28
FGFR2-201ENST00000336553 HAX1O00165 279 aa16.8■□□□□ 0.28
FGFR2-201ENST00000336553 CRXO43186 299 aaPredicted RBP16.8■□□□□ 0.28
FGFR2-201ENST00000336553 APOHP02749 345 aaPredicted RBP16.8■□□□□ 0.28
FGFR2-201ENST00000336553 KLRB1Q12918 225 aa16.8■□□□□ 0.28
FGFR2-201ENST00000336553 SPTA1P02549 2419 aa16.79■□□□□ 0.28
FGFR2-201ENST00000336553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.79■□□□□ 0.28
FGFR2-201ENST00000336553 TRBV19A0A075B6N1 114 aa16.79■□□□□ 0.28
FGFR2-201ENST00000336553 hDV102S1A0JD36 115 aa16.79■□□□□ 0.28
FGFR2-201ENST00000336553 CSN3P07498 182 aa16.79■□□□□ 0.28
FGFR2-201ENST00000336553 HOXB4P17483 251 aaPredicted RBP16.79■□□□□ 0.28
FGFR2-201ENST00000336553 K7EIM0 57 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 BPIFA4PQ86YQ2 179 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 IGFBPL1Q8WX77 278 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 SHANK2-AS3Q9BTD1 123 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 TIMM8BQ9Y5J9 83 aaPredicted RBP16.78■□□□□ 0.28
FGFR2-201ENST00000336553 TIMM23O14925 209 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 HTR1DP28221 377 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 ADORA2A-AS1P86434 159 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 LDLRAD2Q5SZI1 272 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 MCRIP2Q9BUT9 160 aaKnown RBP16.78■□□□□ 0.28
FGFR2-201ENST00000336553 ONECUT1Q9UBC0 465 aa16.78■□□□□ 0.28
FGFR2-201ENST00000336553 SPTBN4Q9H254 2564 aa16.77■□□□□ 0.28
FGFR2-201ENST00000336553 ARMS2P0C7Q2 107 aa16.77■□□□□ 0.28
FGFR2-201ENST00000336553 C16orf54Q6UWD8 224 aa16.77■□□□□ 0.28
FGFR2-201ENST00000336553 MUC15Q8N387 334 aa16.77■□□□□ 0.28
FGFR2-201ENST00000336553 S4R3C0 116 aa16.77■□□□□ 0.28
FGFR2-201ENST00000336553 H0Y8G0 127 aa16.77■□□□□ 0.27
FGFR2-201ENST00000336553 OVOL3O00110 214 aa16.77■□□□□ 0.27
FGFR2-201ENST00000336553 ORAOV1Q8WV07 137 aa16.77■□□□□ 0.27
FGFR2-201ENST00000336553 TMUB1Q9BVT8 246 aa16.77■□□□□ 0.27
FGFR2-201ENST00000336553 LRBAP50851 2863 aa16.77■□□□□ 0.27
FGFR2-201ENST00000336553 ARHGAP32A7KAX9 2087 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 ABCA4P78363 2273 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 ATRXP46100 2492 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 A0A1B0GUT8 65 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 LY6LH3BQJ8 138 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 C1RLQ9NZP8 487 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 LIPFP07098 398 aa16.76■□□□□ 0.27
FGFR2-201ENST00000336553 KLF17Q5JT82 389 aaPredicted RBP16.76■□□□□ 0.27
FGFR2-201ENST00000336553 H3BRN7 92 aa16.75■□□□□ 0.27
FGFR2-201ENST00000336553 HLA-DRB1P01911 266 aa16.75■□□□□ 0.27
FGFR2-201ENST00000336553 IL4P05112 153 aa16.75■□□□□ 0.27
FGFR2-201ENST00000336553 SIGLEC15Q6ZMC9 328 aa16.75■□□□□ 0.27
FGFR2-201ENST00000336553 TPPP3Q9BW30 176 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms