RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
SLIT3-201ENST00000332966 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 NBR2O15453 112 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 TSPAN13O95857 204 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 B9A039 149 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV1-16P04430 117 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 HAX1O00165 279 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 SH2D1AO60880 128 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZNF56Q15929 161 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
SLIT3-201ENST00000332966 FER1L5A0AVI2 2057 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 RNFT1Q5M7Z0 435 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 WDR86Q86TI4 376 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
SLIT3-201ENST00000332966 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 A0A1W2PPM0 123 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 C9orf172C9J069 976 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV3-66A0A0C4DH42 116 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 F8W1H4 67 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 JMJD8Q96S16 334 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 LSM4Q9Y4Z0 139 aaKnown RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 SIVA1O15304 175 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 CD24P25063 80 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 PLSCR4Q9NRQ2 329 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 NDUFA4L2Q9NRX3 87 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 H7C1H1 209 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CFHR2P36980 270 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM238C9JI98 176 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
SLIT3-201ENST00000332966 DOCK7Q96N67 2140 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 PF4V1P10720 104 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 FAM168AQ92567 244 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 PAX1P15863 534 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 BSPH1Q075Z2 132 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 TRAV8-4A0A0B4J246 113 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF503-AS2A6NEH8 195 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 ETDBQ3ZM63 59 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 RNF5Q99942 180 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
SLIT3-201ENST00000332966 RHOGP84095 191 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 HEATR1Q9H583 2144 aaKnown RBP12.86□□□□□ -0.35
SLIT3-201ENST00000332966 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 PDE6HQ13956 83 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 A0A1W2PPI3 338 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 ATP6V0BQ99437 205 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 FAM106AQ4KMX7 169 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF747Q9BV97 191 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 FGF23Q9GZV9 251 aaPredicted RBP12.84□□□□□ -0.35
SLIT3-201ENST00000332966 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 SIGLEC9Q9Y336 463 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 ROS1P08922 2347 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 CEACAM4O75871 244 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV4-39P01824 125 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms