RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 NMUP48645 174 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 WT1-ASQ06250 92 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 MOGAT3Q86VF5 341 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 VSTM2AQ8TAG5 236 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 TSSC4Q9Y5U2 329 aaPredicted RBP10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 A0A096LNJ9 63 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 hADV38S2A0JD32 116 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 A6NDN8 102 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 A0A1W2PPM0 123 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 CECR9P0C854 216 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 CACNG7P62955 275 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 ADTRPQ96IZ2 230 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 K7ERJ3 54 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 OVOL3O00110 214 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 CGB3P0DN86 165 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 CGB7P0DN87 165 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 HSD52Q0P140 79 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 SRSF6Q13247 344 aaKnown RBP10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 FAM222BQ8WU58 562 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
CCDC88C-201ENST00000331194 A1L4Q6 167 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 K7EQM0 130 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 DLL1O00548 723 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 SRSF12Q8WXF0 261 aaKnown RBP10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 ZNF785A8K8V0 405 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 LTAP01374 205 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 CD59P13987 128 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 C6orf15Q6UXA7 325 aaPredicted RBP10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 ADAMTSL5Q6ZMM2 481 aa10.77□□□□□ -0.69
CCDC88C-201ENST00000331194 KBTBD11-OT1A0A1B0GTJ5 212 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 NKX2-8O15522 239 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 FCGR2BP31994 310 aaPredicted RBP10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 TIMM23BQ5SRD1 257 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 HCP5Q6MZN7 132 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 ABHD17AQ96GS6 310 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 Q9H3A6 140 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 NCOR2Q9Y618 2525 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 CGB1A6NKQ9 187 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 SPRY3O43610 288 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 TCRAP04437 139 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 ERHP84090 104 aaKnown RBP10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 DIAPH2-AS1Q14236 149 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 CCDC144NLQ6NUI1 221 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 HARBI1Q96MB7 349 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
CCDC88C-201ENST00000331194 POU2AF1Q16633 256 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 MRPL20Q9BYC9 149 aaKnown RBP10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 GAGE12HA6NDE8 117 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 CSN1S1P47710 185 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
CCDC88C-201ENST00000331194 HAX1O00165 279 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 GCSHP23434 173 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 FXYD2P54710 66 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 SAMD5Q5TGI4 173 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 INO80CQ6PI98 192 aaPredicted RBP10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 DEFB124Q8NES8 71 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 DKK2Q9UBU2 259 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 TMSB15BA0A087X1C1 80 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 FAM216BQ8N7L0 139 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 PPP1R35Q8TAP8 253 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 CCL13Q99616 98 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 GEMIN7Q9H840 131 aaKnown RBP10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 TPSG1Q9NRR2 321 aa10.74□□□□□ -0.69
CCDC88C-201ENST00000331194 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 PSG3Q16557 428 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 ZADH2Q8N4Q0 377 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 PCNX1Q96RV3 2341 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 TRGV5A0A0B4J1U4 118 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 FABP2P12104 132 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 SIGLEC8Q9NYZ4 499 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 ATRXP46100 2492 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 A0A1W2PRD5 423 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 A0A1W2PRF3 423 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 A0A1W2PRM7 423 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 D6R8Y8 96 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 OR5AN1Q8NGI8 311 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 RITA1Q96K30 269 aa10.73□□□□□ -0.69
CCDC88C-201ENST00000331194 SS18L2Q9UHA2 77 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms