RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SLC25A39Q9BZJ4 359 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-201ENST00000328560 HBBP68871 147 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 MSRB2Q9Y3D2 182 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 H0Y8G0 127 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 KLRD1Q13241 179 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 GTSF1Q8WW33 167 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 KLRB1Q12918 225 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 ZNF672Q499Z4 452 aaPredicted RBP11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 C7orf69Q9H7B7 122 aa11.17□□□□□ -0.62
ATP2C1-201ENST00000328560 M0QZK8 103 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 CHEK1O14757 476 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 CRYGBP07316 175 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 CSN3P07498 182 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 HNRNPA3P51991 378 aaKnown RBP11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 TOMM40O96008 361 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 ZNF138P52744 262 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 TNFRSF14Q92956 283 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
ATP2C1-201ENST00000328560 LDLRAD2Q5SZI1 272 aa11.15□□□□□ -0.62
ATP2C1-201ENST00000328560 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
ATP2C1-201ENST00000328560 WIPF2Q8TF74 440 aaPredicted RBP11.15□□□□□ -0.62
ATP2C1-201ENST00000328560 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
ATP2C1-201ENST00000328560 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
ATP2C1-201ENST00000328560 IL4P05112 153 aa11.15□□□□□ -0.63
ATP2C1-201ENST00000328560 FCGR2BP31994 310 aaPredicted RBP11.15□□□□□ -0.63
ATP2C1-201ENST00000328560 RASL11AQ6T310 242 aa11.15□□□□□ -0.63
ATP2C1-201ENST00000328560 MLST8Q9BVC4 326 aa11.15□□□□□ -0.63
ATP2C1-201ENST00000328560 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.63
ATP2C1-201ENST00000328560 IGKV1-17P01599 117 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 LIPFP07098 398 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 UQCR10Q9UDW1 63 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 LTAP01374 205 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 HTR1DP28221 377 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 I3L2K1 104 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 M0R3E3 92 aa11.14□□□□□ -0.63
ATP2C1-201ENST00000328560 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 IGLC2P0DOY2 106 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 IGLC3P0DOY3 106 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 Q86TA4 180 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 CSMD1Q96PZ7 3565 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 SIAH2O43255 324 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 COTL1Q14019 142 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 RBPMS2Q6ZRY4 209 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
ATP2C1-201ENST00000328560 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 CTRLP40313 264 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 HINT1P49773 126 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 BCL6BQ8N143 479 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 GNG7O60262 68 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
ATP2C1-201ENST00000328560 DCHS2Q6V1P9 2916 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 K7EIM0 57 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 OR2J3O76001 311 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 NPSP0C0P6 89 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 CEACAM3P40198 252 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 PRSS22Q9GZN4 317 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 CDSNQ15517 529 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 NBR2O15453 112 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 PLP1P60201 277 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
ATP2C1-201ENST00000328560 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 SPATA12Q7Z6I5 190 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 STPG4Q8N801 248 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 GOLT1BQ9Y3E0 138 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
ATP2C1-201ENST00000328560 DLEU1O43261 78 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 ARMS2P0C7Q2 107 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 TMEM70Q9BUB7 260 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 TRBV19A0A075B6N1 114 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms