RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CEACAM4O75871 244 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 OR4A5Q8NH83 315 aa10.31□□□□□ -0.76
HMGCS1-201ENST00000325110 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 K7EQM0 130 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 TIMM23O14925 209 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 IGLL1P15814 213 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 RBPJQ06330 500 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 IGFL3Q6UXB1 125 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 SLC25A39Q9BZJ4 359 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 CBY3A6NI87 242 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 VWC2LB2RUY7 222 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 FXYD7P58549 80 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 RBPMS2Q6ZRY4 209 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 FA2HQ7L5A8 372 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 MUC15Q8N387 334 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
HMGCS1-201ENST00000325110 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 TSPOP30536 169 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 KLRD1Q13241 179 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 BPIFA4PQ86YQ2 179 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 OR8A1Q8NGG7 326 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 C8orf46Q8TAG6 207 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 LRBAP50851 2863 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 TRGV9Q99603 122 aa10.29□□□□□ -0.76
HMGCS1-201ENST00000325110 Q8N976 141 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 TEX45Q8NA69 505 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 SCNM1Q9BWG6 230 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 MRPL27Q9P0M9 148 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 F11RQ9Y624 299 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 IGHV3OR16-13A0A075B7E8 117 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 IGHV3-74A0A0B4J1X5 117 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 APOBEC3AP31941 199 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 TMEM191AQ9H0A3 160 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 SPTBN4Q9H254 2564 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
HMGCS1-201ENST00000325110 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.76
HMGCS1-201ENST00000325110 BUB1B-PAK6H3BSN5 160 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 LINC00614P0C842 121 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 GRNP28799 593 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 AAMDCQ9H7C9 122 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 NUDT3O95989 172 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 APOHP02749 345 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 CSN1S1P47710 185 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 Q86TA4 180 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 TOMM40O96008 361 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 C3orf36Q3SXR2 165 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 OR4C5Q8NGB2 326 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
HMGCS1-201ENST00000325110 A0A1B0GUT8 65 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 HLA-DRB1P01911 266 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 GP9P14770 177 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 MBD6Q96DN6 1003 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 IGLC1P0CG04 106 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 MPV17L2Q567V2 206 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 FAM162BQ5T6X4 162 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
HMGCS1-201ENST00000325110 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 RIGQ13278 110 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 TMEM116Q8NCL8 245 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 ZNF738Q8NE65 137 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 AP5S1Q9NUS5 200 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 NHLH1Q02575 133 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 ATP5L2Q7Z4Y8 100 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 LOC102724200A0A096LPH7 203 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 SHISA9B4DS77 424 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 B9A039 149 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
HMGCS1-201ENST00000325110 IGHV3-66A0A0C4DH42 116 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 OR2J3O76001 311 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 CTRLP40313 264 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 TIMD4Q96H15 378 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 RELNP78509 3460 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 ZNF672Q499Z4 452 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 Q8TAT8 98 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 ZC2HC1AQ96GY0 325 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 UQCRFS1P47985 274 aa10.24□□□□□ -0.77
HMGCS1-201ENST00000325110 SPATA12Q7Z6I5 190 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms