RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 COL4A6Q14031 1691 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 A0A087X0M5 115 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 A0A1B0GX30 115 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 APOMO95445 188 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 CD28P10747 220 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 CBLN1P23435 193 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 TMEM249Q2WGJ8 235 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 C1orf194Q5T5A4 169 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 C18orf15Q96N68 181 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 PLXNA3P51805 1871 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 LAMA3Q16787 3333 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 MUC21A0A0G2JKD1 596 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 MUC21A0A140T8X8 626 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 SRP19P09132 144 aaKnown RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 STAG3L3P0CL85 134 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 YPEL3P61236 119 aaPredicted RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 GNG5P63218 68 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 PSG3Q16557 428 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 UBE2E2Q96LR5 201 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 SCRT1Q9BWW7 348 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 JKAMPQ9P055 326 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 TSSC4Q9Y5U2 329 aaPredicted RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 NPIPB5A8MRT5 1133 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 HAPLN4Q86UW8 402 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 OR5A1Q8NGJ0 315 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 IGHV2-5P01817 119 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 CKS1BP61024 79 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 TANC1Q9C0D5 1861 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 PRB1P04280 392 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 WT1P19544 449 aaPredicted RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 NDPQ00604 133 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 SPATA31B1PQ5VZV4 182 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 MORN3Q6PF18 240 aaPredicted RBP7.26□□□□□ -1.25
CD28-201ENST00000324106 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 RMI2Q96E14 147 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 FOXC2Q99958 501 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 NCOR2Q9Y618 2525 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 LRRK1Q38SD2 2015 aa7.26□□□□□ -1.25
CD28-201ENST00000324106 TRAV9-2A0A087WT02 112 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 TRAV12-3A0A0B4J271 114 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 SLC17A3O00476 420 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 NDUFA4O00483 81 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 DEFB130BP0DP73 79 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 DEFB130AP0DP74 79 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 LHFPL4Q7Z7J7 247 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 MBD3L1Q8WWY6 194 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 ZSWIM8A7E2V4 1837 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 RNF182Q8N6D2 247 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 LINC00473A8K010 186 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
CD28-201ENST00000324106 Q6ZR03 302 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 SDHCQ99643 169 aaPredicted RBP7.25□□□□□ -1.25
CD28-201ENST00000324106 FANCMQ8IYD8 2048 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 PHF3Q92576 2039 aaKnown RBP7.25□□□□□ -1.25
CD28-201ENST00000324106 HOXA3O43365 443 aaPredicted RBP7.25□□□□□ -1.25
CD28-201ENST00000324106 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 RNASE2P10153 161 aaKnown RBP7.25□□□□□ -1.25
CD28-201ENST00000324106 TCTEX1D4Q5JR98 221 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
CD28-201ENST00000324106 RNF222A6NCQ9 220 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 TCRAP04437 139 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 SLAQ13239 276 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 SPATA45Q537H7 98 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 COL5A1-AS1Q5SY13 56 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 TSKUQ8WUA8 353 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 ANK1P16157 1881 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 PLNP26678 52 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 Q5BKY6 102 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 C1QL4Q86Z23 238 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 IGKV2-40A0A087WW87 121 aaPredicted RBP7.24□□□□□ -1.25
CD28-201ENST00000324106 A0A087WWC5 75 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 A0A1W2PPI3 338 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 F5H768 121 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 IGKV2D-40P01614 121 aaPredicted RBP7.24□□□□□ -1.25
CD28-201ENST00000324106 HBDP02042 147 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 WFDC12Q8WWY7 111 aa7.24□□□□□ -1.25
CD28-201ENST00000324106 KIAA1671Q9BY89 1806 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 SCN8AQ9UQD0 1980 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 C5orf63A6NC05 138 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 SHISA9B4DS77 424 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 VCYO14598 125 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 IGKV1-16P04430 117 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 RNF126Q9BV68 326 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 DOCK9Q9BZ29 2069 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 ZNF833PQ6ZTB9 187 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 CCDC168Q8NDH2 2452 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 GFI1Q99684 422 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 PRO3102Q9H379 93 aa7.23□□□□□ -1.25
CD28-201ENST00000324106 TRAV3A0A0B4J244 114 aa7.22□□□□□ -1.25
CD28-201ENST00000324106 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
CD28-201ENST00000324106 FBXL19-AS1Q494R0 122 aa7.22□□□□□ -1.25
CD28-201ENST00000324106 NAV2Q8IVL1 2488 aa7.22□□□□□ -1.25
CD28-201ENST00000324106 RPL23P62829 140 aaKnown RBP7.22□□□□□ -1.25
CD28-201ENST00000324106 DEFB112Q30KQ8 113 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms