RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 A0A1W2PRM7 423 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 VWC2LB2RUY7 222 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 IGLV2-11P01706 119 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 HLA-DRB1P01911 266 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 CAMPP49913 170 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 KRTDAPP60985 99 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 TMEM75Q8N9X5 138 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 FANCD2OSQ96PS1 177 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 ALKBH7Q9BT30 221 aaPredicted RBP17.62■□□□□ 0.41
PNKP-201ENST00000322344 VAMP8Q9BV40 100 aa17.62■□□□□ 0.41
PNKP-201ENST00000322344 KALRNO60229 2985 aa17.61■□□□□ 0.41
PNKP-201ENST00000322344 K7EQM0 130 aa17.61■□□□□ 0.41
PNKP-201ENST00000322344 RBPMS2Q6ZRY4 209 aaKnown RBP17.61■□□□□ 0.41
PNKP-201ENST00000322344 THYN1Q9P016 225 aa17.61■□□□□ 0.41
PNKP-201ENST00000322344 ZFP30Q9Y2G7 519 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 A6NNC1 897 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 DIRC3C9JPN6 131 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 COL8A1P27658 744 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 KLF17Q5JT82 389 aaPredicted RBP17.6■□□□□ 0.41
PNKP-201ENST00000322344 FAM162BQ5T6X4 162 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 SIGLEC15Q6ZMC9 328 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 PRNTQ86SH4 94 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 GTSF1Q8WW33 167 aa17.6■□□□□ 0.41
PNKP-201ENST00000322344 A0A1B0GV90 55 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 NCBP2LA6PVI3 153 aaKnown RBP17.59■□□□□ 0.41
PNKP-201ENST00000322344 MRPS12O15235 138 aaKnown RBP17.59■□□□□ 0.41
PNKP-201ENST00000322344 NIT1Q86X76 327 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 IGFBPL1Q8WX77 278 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 TRAV8-1A0A0A6YYK1 113 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 SCGB2A1O75556 95 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 FCGR2BP31994 310 aaPredicted RBP17.59■□□□□ 0.41
PNKP-201ENST00000322344 PDE6HQ13956 83 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 FBLN7Q53RD9 439 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 C16orf54Q6UWD8 224 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 DYNAPQ8N1N2 210 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 RNF114Q9Y508 228 aa17.59■□□□□ 0.41
PNKP-201ENST00000322344 MRPL52Q86TS9 123 aaKnown RBP17.58■□□□□ 0.4
PNKP-201ENST00000322344 CIARTQ8N365 385 aaPredicted RBP17.58■□□□□ 0.4
PNKP-201ENST00000322344 Q8N976 141 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 OR2D3Q8NGH3 330 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 BORCS7Q96B45 105 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 ZNF414Q96IQ9 312 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 SSBP4Q9BWG4 385 aaPredicted RBP17.58■□□□□ 0.4
PNKP-201ENST00000322344 SIRPDQ9H106 197 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 C21orf62Q9NYP8 219 aa17.58■□□□□ 0.4
PNKP-201ENST00000322344 SFTPCP11686 197 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 TMEM11P17152 192 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 ZFP36P26651 326 aaKnown RBP17.57■□□□□ 0.4
PNKP-201ENST00000322344 PGLYRP4Q96LB8 373 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 HSBP1O75506 76 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 NDPQ00604 133 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 Q56UQ5 140 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 MIEN1Q9BRT3 115 aa17.57■□□□□ 0.4
PNKP-201ENST00000322344 M0R143 59 aa17.56■□□□□ 0.4
PNKP-201ENST00000322344 C17orf77Q96MU5 243 aa17.56■□□□□ 0.4
PNKP-201ENST00000322344 C1RLQ9NZP8 487 aa17.56■□□□□ 0.4
PNKP-201ENST00000322344 FOXA3P55318 350 aaPredicted RBP17.55■□□□□ 0.4
PNKP-201ENST00000322344 PSG3Q16557 428 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 TDRG1Q3Y452 100 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 PSG8Q9UQ74 426 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 PAM16Q9Y3D7 125 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 DCHS1Q96JQ0 3298 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 F8W735 103 aaPredicted RBP17.55■□□□□ 0.4
PNKP-201ENST00000322344 TOX4O94842 621 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 C3orf79P0CE67 100 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 NTF3P20783 257 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 FAM19A2Q8N3H0 131 aa17.55■□□□□ 0.4
PNKP-201ENST00000322344 SERTM2A0A1B0GWG4 89 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 A0A1W2PPR1 153 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 EREGO14944 169 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 FAM106CPP0CH98 169 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 EFNA4P52798 201 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 TXN2Q99757 166 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 AAMDCQ9H7C9 122 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 S4R3C0 116 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 IGHV2-70DA0A0C4DH43 119 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 HAX1O00165 279 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 SSTP61278 116 aa17.54■□□□□ 0.4
PNKP-201ENST00000322344 RAB4AP20338 218 aa17.53■□□□□ 0.4
PNKP-201ENST00000322344 PSG9Q00887 426 aa17.53■□□□□ 0.4
PNKP-201ENST00000322344 ZC2HC1AQ96GY0 325 aa17.53■□□□□ 0.4
PNKP-201ENST00000322344 SNHG12Q9BXW3 62 aa17.53■□□□□ 0.4
PNKP-201ENST00000322344 NDUFB8O95169 186 aa17.52■□□□□ 0.4
PNKP-201ENST00000322344 S100A7P31151 101 aa17.52■□□□□ 0.4
PNKP-201ENST00000322344 UBE2E1P51965 193 aa17.52■□□□□ 0.4
PNKP-201ENST00000322344 RNASEKQ6P5S7 137 aaKnown RBP17.52■□□□□ 0.4
PNKP-201ENST00000322344 ZNF705AQ6ZN79 300 aaPredicted RBP17.52■□□□□ 0.4
PNKP-201ENST00000322344 ARL6IP6Q8N6S5 226 aa17.52■□□□□ 0.4
PNKP-201ENST00000322344 UBTD1Q9HAC8 227 aa17.52■□□□□ 0.4
PNKP-201ENST00000322344 IGHV7-81A0A0B4J1V7 117 aa17.52■□□□□ 0.39
PNKP-201ENST00000322344 M0R2Z0 102 aa17.52■□□□□ 0.39
PNKP-201ENST00000322344 CHEK1O14757 476 aa17.52■□□□□ 0.39
PNKP-201ENST00000322344 M0QZK8 103 aa17.51■□□□□ 0.39
PNKP-201ENST00000322344 RPL7P18124 248 aaKnown RBP17.51■□□□□ 0.39
PNKP-201ENST00000322344 Q8N9W7 124 aa17.51■□□□□ 0.39
PNKP-201ENST00000322344 NDUFS7O75251 213 aa17.5■□□□□ 0.39
PNKP-201ENST00000322344 EGR2P11161 476 aaPredicted RBP17.5■□□□□ 0.39
PNKP-201ENST00000322344 CSN1S1P47710 185 aa17.5■□□□□ 0.39
PNKP-201ENST00000322344 NDFIP1Q9BT67 221 aa17.5■□□□□ 0.39
PNKP-201ENST00000322344 ABCA4P78363 2273 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms