RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C7orf69Q9H7B7 122 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 ZNF319Q9P2F9 582 aa13.96□□□□□ -0.18
SMCHD1-201ENST00000320876 A0A1W2PRX2 142 aa13.96□□□□□ -0.18
SMCHD1-201ENST00000320876 SSC4DQ8WTU2 575 aa13.96□□□□□ -0.18
SMCHD1-201ENST00000320876 PMS2P5A8MQ11 134 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 PPP1R32Q7Z5V6 425 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 FDCSPQ8NFU4 85 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 WNK1Q9H4A3 2382 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 WBP1Q96G27 269 aa13.95□□□□□ -0.18
SMCHD1-201ENST00000320876 NEGR1Q7Z3B1 354 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 RBMY1FQ15415 496 aaKnown RBP13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 FAM201AQ5SY85 155 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 LYZL1Q6UWQ5 148 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 C15orf32Q32M92 178 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 VSIRQ9H7M9 311 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 PCDH15Q96QU1 1955 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 C9JAW5 83 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 RPL32P62910 135 aaKnown RBP13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 ZNF415Q09FC8 603 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 TRBV7-1A0A0A6YYK4 115 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 TIAF1O95411 115 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 SPANXCQ9NY87 97 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 SMAD7O15105 426 aaKnown RBP13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 IFITM1P13164 125 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 THSD7AQ9UPZ6 1657 aa13.94□□□□□ -0.18
SMCHD1-201ENST00000320876 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 RCHY1Q96PM5 261 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 A0A087WX48 190 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 SUMO4Q6EEV6 95 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 PRSS22Q9GZN4 317 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 WDR83OSQ9Y284 106 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 F8W1H4 67 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 TMEM256Q8N2U0 113 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 A0A0A6YYD4 124 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 ZNF138P52744 262 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 PYY3Q5JQD4 70 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 C3orf79P0CE67 100 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 CSTL1Q9H114 145 aa13.93□□□□□ -0.18
SMCHD1-201ENST00000320876 SIGLEC12Q96PQ1 595 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 A8MWP6 167 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 LYPD1Q8N2G4 141 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 LCN12Q6JVE5 192 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 INSP01308 110 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 SPSB3Q6PJ21 355 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 MRAPQ8TCY5 172 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 NCOA6Q14686 2063 aaPredicted RBP13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 CELA3AP09093 270 aa13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 RPL15P61313 204 aaKnown RBP13.92□□□□□ -0.18
SMCHD1-201ENST00000320876 CREBBPQ92793 2442 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 NDUFS6O75380 124 aaKnown RBP13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 TMEM158Q8WZ71 300 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 LYZL4Q96KX0 146 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 FAM27E3Q08E93 113 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 SH2D1AO60880 128 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 LINC00477Q96M19 166 aa13.91□□□□□ -0.18
SMCHD1-201ENST00000320876 CCL3L1P16619 93 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 IGKV1-9A0A0C4DH69 117 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 C2orf16Q68DN1 1984 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 TCRAP04437 139 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 ZNF664Q8N3J9 261 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 ATP1A1-AS1Q5TC04 95 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 SOCS3O14543 225 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 C6orf226Q5I0X4 101 aa13.9□□□□□ -0.18
SMCHD1-201ENST00000320876 ZNF474Q6S9Z5 364 aaPredicted RBP13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 LILRA1O75019 489 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 WNT2P09544 360 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 ALPK3Q96L96 1907 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 IGHV3-73A0A0B4J1V6 119 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 TRACP01848 142 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 PPDPFLQ8WWR9 84 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 CD33P20138 364 aa13.89□□□□□ -0.19
SMCHD1-201ENST00000320876 PAQR4Q8N4S7 273 aaPredicted RBP13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 SRD5A1P18405 259 aa13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 SUPT4H1P63272 117 aaKnown RBP13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 TIMM23O14925 209 aa13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 RPP25LQ8N5L8 163 aaKnown RBP13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 DSCAML1Q8TD84 2053 aa13.88□□□□□ -0.19
SMCHD1-201ENST00000320876 TRAV41A0A0B4J266 112 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 C9orf118A6NHY6 69 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 SS18Q15532 418 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 ZC2HC1BQ5TFG8 222 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 LY6G5BQ8NDX9 201 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 PDE6HQ13956 83 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 ANAPC10Q9UM13 185 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 IGLV3-32A0A0A0MS00 114 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms