RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 ADARB2-AS1A8MUL3 147 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 PSMG4Q5JS54 123 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
USF3-201ENST00000316407 PPBPP02775 128 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 TREML4Q6UXN2 200 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 ZC2HC1BQ5TFG8 222 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 MAFAQ8NHW3 353 aaPredicted RBP7.23□□□□□ -1.25
USF3-201ENST00000316407 SMPXQ9UHP9 88 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 CACNG8Q8WXS5 425 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 A0A087WWL8 130 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 RPRMLQ8N4K4 120 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 TGFBR3LH3BV60 316 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 TIMM21Q9BVV7 248 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 TMEM171Q8WVE6 324 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 CYYR1Q96J86 154 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 TRAV41A0A0B4J266 112 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 SH2D1AO60880 128 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
USF3-201ENST00000316407 C14orf178Q8N769 122 aaPredicted RBP7.23□□□□□ -1.25
USF3-201ENST00000316407 CCL19Q99731 98 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 C1QTNF5Q9BXJ0 243 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 PTPRQQ9UMZ3 2332 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 TMEM167AQ8TBQ9 72 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 BSPH1Q075Z2 132 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 PRR33A8MZF0 331 aa7.23□□□□□ -1.25
USF3-201ENST00000316407 LILRA1O75019 489 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 ZNF497Q6ZNH5 498 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 PTPN13Q12923 2485 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 F8W1H4 67 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 NDPQ00604 133 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 PMVKQ15126 192 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 SIP14410 1827 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 CXCL10P02778 98 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 OSR1Q8TAX0 266 aaPredicted RBP7.22□□□□□ -1.25
USF3-201ENST00000316407 COL18A1P39060 1754 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 C21orf140B9A014 251 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 PILRAQ9UKJ1 303 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 C9JQL5 133 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 CSPG4Q6UVK1 2322 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 SIGLEC15Q6ZMC9 328 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 C1orf210Q8IVY1 113 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 IGFL4Q6B9Z1 124 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
USF3-201ENST00000316407 UNQ6494/PRO21346Q6UXR6 183 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 TMEM54Q969K7 222 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 FGF11Q92914 225 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 FGFBP3Q8TAT2 258 aa7.22□□□□□ -1.25
USF3-201ENST00000316407 ZNF501Q96CX3 271 aaPredicted RBP7.22□□□□□ -1.25
USF3-201ENST00000316407 RNF115Q9Y4L5 304 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 COL4A1P02462 1669 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 TRBV6-7A0A0A0MS04 114 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 SRRM4A7MD48 611 aaKnown RBP7.21□□□□□ -1.25
USF3-201ENST00000316407 C1orf159Q96HA4 380 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 ATP5J2P56134 94 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.25
USF3-201ENST00000316407 A0A1B0GWJ7 208 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 CDKN1BP46527 198 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.25
USF3-201ENST00000316407 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 RFPL3SP0C7P2 107 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 hADV29S1A0JD25 119 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 NDUFA2O43678 99 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 ADAMTS9Q9P2N4 1935 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 FGF6P10767 208 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.26
USF3-201ENST00000316407 ATP1A1-AS1Q5TC04 95 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 SLAQ13239 276 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 CCL3L1P16619 93 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 C20orf144Q9BQM9 153 aa7.21□□□□□ -1.26
USF3-201ENST00000316407 IGLC2P0DOY2 106 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 IGLC3P0DOY3 106 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 IGFBP3P17936 291 aaPredicted RBP7.2□□□□□ -1.26
USF3-201ENST00000316407 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 RHOGP84095 191 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 PAQR4Q8N4S7 273 aaPredicted RBP7.2□□□□□ -1.26
USF3-201ENST00000316407 CARD19Q96LW7 228 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 C5orf24Q7Z6I8 188 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 SLC25A39Q9BZJ4 359 aaPredicted RBP7.2□□□□□ -1.26
USF3-201ENST00000316407 GAGE7O76087 117 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 GAGE12FP0CL80 117 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 GAGE12GP0CL81 117 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 GAGE12IP0CL82 117 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 IGKV1-9A0A0C4DH69 117 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 MORN2Q502X0 79 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 PPP1R32Q7Z5V6 425 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 STHQ8IWL8 128 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 TMEM133Q9H2Q1 129 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 NRXN2Q9P2S2 1712 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 BVES-AS1Q5T3Y7 98 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 K7EMI3 77 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 FCN3O75636 299 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 HAMPP81172 84 aa7.2□□□□□ -1.26
USF3-201ENST00000316407 IGHV2OR16-5A0A0B4J2B6 119 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms