RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 RPL35AP18077 110 aaKnown RBP15.11■□□□□ 0.01
UBXN2A-201ENST00000309033 MEGF9Q9H1U4 602 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 CEP250Q9BV73 2442 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 ERCC8Q13216 396 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 LINC00479Q96M42 142 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 TRAV8-2A0A0B4J237 113 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 RUSC1-AS1Q66K80 236 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 UNQ6494/PRO21346Q6UXR6 183 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 SMKR1H3BMG3 65 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 ASCL4Q6XD76 172 aa15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 NAA38Q9BRA0 125 aaKnown RBP15.1■□□□□ 0.01
UBXN2A-201ENST00000309033 SAA4P35542 130 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 ZNF876PQ49A33 203 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 SPSB3Q6PJ21 355 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 Q6ZS49 121 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 LSM4Q9Y4Z0 139 aaKnown RBP15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 hDV102S1A0JD36 115 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 OOSP1A8MZH6 123 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 ZNF524Q96C55 264 aa15.09■□□□□ 0.01
UBXN2A-201ENST00000309033 LYL1P12980 280 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 TRGV1A0A0A0MS02 117 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 TOMM40O96008 361 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 CRPP02741 224 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 ADCYAP1P18509 176 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 C14orf178Q8N769 122 aaPredicted RBP15.08■□□□□ 0
UBXN2A-201ENST00000309033 OR9G4Q8NGQ1 327 aa15.08■□□□□ 0
UBXN2A-201ENST00000309033 FER1L5A0AVI2 2057 aa15.07■□□□□ 0
UBXN2A-201ENST00000309033 SRSF4Q08170 494 aaKnown RBP15.07■□□□□ 0
UBXN2A-201ENST00000309033 DUX4L9Q6RFH8 374 aaPredicted RBP15.07■□□□□ 0
UBXN2A-201ENST00000309033 LY6G6EA0A0G2JKS1 128 aa15.07■□□□□ 0
UBXN2A-201ENST00000309033 MCRIP2Q9BUT9 160 aaKnown RBP15.07■□□□□ 0
UBXN2A-201ENST00000309033 U3KQA8 63 aa15.07■□□□□ 0
UBXN2A-201ENST00000309033 PHF3Q92576 2039 aaKnown RBP15.07■□□□□ 0
UBXN2A-201ENST00000309033 LCNL1Q6ZST4 164 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 UBE2E2Q96LR5 201 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 PROK2Q9HC23 129 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 A0A1W2PPI3 338 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 C9orf139Q6ZV77 190 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 RSPO3Q9BXY4 272 aaPredicted RBP15.06■□□□□ 0
UBXN2A-201ENST00000309033 TNFSF13O75888 250 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 LINC00158P58513 81 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 MAPK1IP1LQ8NDC0 245 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
UBXN2A-201ENST00000309033 ZNF503-AS2A6NEH8 195 aa15.05■□□□□ 0
UBXN2A-201ENST00000309033 RHPN1-AS1Q9BWJ2 59 aa15.05■□□□□ 0
UBXN2A-201ENST00000309033 PTPRDP23468 1912 aa15.05■□□□□ -0
UBXN2A-201ENST00000309033 PLNP26678 52 aa15.05■□□□□ -0
UBXN2A-201ENST00000309033 A0A087WWL8 130 aa15.05■□□□□ -0
UBXN2A-201ENST00000309033 GUSBP1Q15486 140 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 MYLKQ15746 1914 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 EP300Q09472 2414 aaPredicted RBP15.04■□□□□ -0
UBXN2A-201ENST00000309033 AMN1Q8IY45 258 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 A0A1B0GV72 72 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 ZNF479Q96JC4 524 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 TICRRQ7Z2Z1 1910 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 HSD52Q0P140 79 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 FAM90A2PQ658T7 463 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 CSTL1Q9H114 145 aa15.04■□□□□ -0
UBXN2A-201ENST00000309033 OVOL3O00110 214 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 DPH3P1Q9H4G8 78 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 SAMD5Q5TGI4 173 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 RASL11AQ6T310 242 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 Q6ZR03 302 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 Q86TA4 180 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 PRADC1Q9BSG0 188 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 SLC25A2Q9BXI2 301 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 SLC25A20O43772 301 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 LINC00477Q96M19 166 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 SPTBN2O15020 2390 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 FAM223BA6NKX1 122 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 C3orf79P0CE67 100 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 FAM223AQ8IWN6 122 aa15.03■□□□□ -0
UBXN2A-201ENST00000309033 LRRK1Q38SD2 2015 aa15.02■□□□□ -0
UBXN2A-201ENST00000309033 WDR86Q86TI4 376 aa15.02■□□□□ -0
UBXN2A-201ENST00000309033 TMEM158Q8WZ71 300 aa15.02■□□□□ -0
UBXN2A-201ENST00000309033 C9JQL5 133 aa15.02□□□□□ -0.01
UBXN2A-201ENST00000309033 SYNJ2BPP57105 145 aa15.02□□□□□ -0.01
UBXN2A-201ENST00000309033 USMG5Q96IX5 58 aa15.02□□□□□ -0.01
UBXN2A-201ENST00000309033 LY96Q9Y6Y9 160 aa15.02□□□□□ -0.01
UBXN2A-201ENST00000309033 AKAP6Q13023 2319 aa15.02□□□□□ -0.01
UBXN2A-201ENST00000309033 A0A087X0K7 114 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 MS4A6AQ9H2W1 248 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 SHANK2-AS3Q9BTD1 123 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 SMPXQ9UHP9 88 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 PRTN3P24158 256 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 MST1LQ2TV78 715 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 VGLL1Q99990 258 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 ATP6V0E1O15342 81 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 LINC01356Q8N9X3 169 aa15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 PHLDA1Q8WV24 401 aaPredicted RBP15.01□□□□□ -0.01
UBXN2A-201ENST00000309033 M0R2P5 195 aa15□□□□□ -0.01
UBXN2A-201ENST00000309033 C8orf49Q96NF6 230 aa15□□□□□ -0.01
UBXN2A-201ENST00000309033 CNOT1A5YKK6 2376 aaKnown RBP15□□□□□ -0.01
UBXN2A-201ENST00000309033 RNF223E7ERA6 249 aa15□□□□□ -0.01
UBXN2A-201ENST00000309033 TMEM155Q4W5P6 130 aa15□□□□□ -0.01
UBXN2A-201ENST00000309033 BCL6BQ8N143 479 aaPredicted RBP15□□□□□ -0.01
UBXN2A-201ENST00000309033 MTURNQ8N3F0 131 aa15□□□□□ -0.01
UBXN2A-201ENST00000309033 TEX43Q6ZNM6 134 aa14.99□□□□□ -0.01
UBXN2A-201ENST00000309033 LYPD1Q8N2G4 141 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms