RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SHANK2-AS3Q9BTD1 123 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 PRTN3P24158 256 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 ZNF138P52744 262 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 EMP1P54849 157 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 C10orf91Q5T1B1 145 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 UNQ6494/PRO21346Q6UXR6 183 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 RNF138Q8WVD3 245 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
BRD3-201ENST00000303407 TEX36Q5VZQ5 186 aa13.21□□□□□ -0.29
BRD3-201ENST00000303407 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
BRD3-201ENST00000303407 H3BUT2 72 aa13.21□□□□□ -0.29
BRD3-201ENST00000303407 SAA4P35542 130 aa13.21□□□□□ -0.29
BRD3-201ENST00000303407 IFI27P40305 119 aaPredicted RBP13.21□□□□□ -0.29
BRD3-201ENST00000303407 LAGE3Q14657 143 aa13.21□□□□□ -0.29
BRD3-201ENST00000303407 TRGV2A0A075B6R0 118 aa13.21□□□□□ -0.3
BRD3-201ENST00000303407 FAM186AA6NE01 2351 aa13.21□□□□□ -0.3
BRD3-201ENST00000303407 FAM223BA6NKX1 122 aa13.21□□□□□ -0.3
BRD3-201ENST00000303407 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.3
BRD3-201ENST00000303407 CACNA1EQ15878 2313 aa13.21□□□□□ -0.3
BRD3-201ENST00000303407 APOMO95445 188 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 ZNF134P52741 427 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 B4DSR2 109 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
BRD3-201ENST00000303407 VCX2Q9H322 139 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 DMRTC2Q8IXT2 367 aaPredicted RBP13.2□□□□□ -0.3
BRD3-201ENST00000303407 FAM215AQ9Y5M1 114 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 HAPLN4Q86UW8 402 aa13.2□□□□□ -0.3
BRD3-201ENST00000303407 FXYD7P58549 80 aa13.19□□□□□ -0.3
BRD3-201ENST00000303407 C9orf139Q6ZV77 190 aa13.19□□□□□ -0.3
BRD3-201ENST00000303407 MRPS16Q9Y3D3 137 aaKnown RBP13.19□□□□□ -0.3
BRD3-201ENST00000303407 A6NNC1 897 aa13.19□□□□□ -0.3
BRD3-201ENST00000303407 LOXP28300 417 aaPredicted RBP13.19□□□□□ -0.3
BRD3-201ENST00000303407 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
BRD3-201ENST00000303407 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 SCGB1A1P11684 91 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 KRTAP27-1Q3LI81 207 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 MRPL27Q9P0M9 148 aaKnown RBP13.18□□□□□ -0.3
BRD3-201ENST00000303407 ERCC8Q13216 396 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 C5orf30Q96GV9 206 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 C3orf79P0CE67 100 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 MS4A6AQ9H2W1 248 aa13.18□□□□□ -0.3
BRD3-201ENST00000303407 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
BRD3-201ENST00000303407 RUSC1-AS1Q66K80 236 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 GFRA4Q9GZZ7 299 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 FNDC4Q9H6D8 234 aaPredicted RBP13.17□□□□□ -0.3
BRD3-201ENST00000303407 ZNF106Q9H2Y7 1883 aaKnown RBP13.17□□□□□ -0.3
BRD3-201ENST00000303407 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 IL15RAQ13261 267 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 MMP23AO75900 390 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 ORAOV1Q8WV07 137 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
BRD3-201ENST00000303407 FGF23Q9GZV9 251 aaPredicted RBP13.17□□□□□ -0.3
BRD3-201ENST00000303407 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 A0A1B0GWB2 263 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 PFN1P07737 140 aaKnown RBP13.16□□□□□ -0.3
BRD3-201ENST00000303407 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 hDV102S1A0JD36 115 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 CD28P10747 220 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 ZNF562Q6V9R5 426 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 TPSG1Q9NRR2 321 aa13.16□□□□□ -0.3
BRD3-201ENST00000303407 TYMSP04818 313 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 Q8NFD4 153 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 OBSL1O75147 1896 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 SRRM4A7MD48 611 aaKnown RBP13.15□□□□□ -0.3
BRD3-201ENST00000303407 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 TOMM7Q9P0U1 55 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 TRAV12-3A0A0B4J271 114 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 SSC4DQ8WTU2 575 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
BRD3-201ENST00000303407 SMKR1H3BMG3 65 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 FCN3O75636 299 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 CFHR2P36980 270 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 UBE2E1P51965 193 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 NSUN5P1Q3KNT7 163 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 C8orf49Q96NF6 230 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 SMPXQ9UHP9 88 aa13.15□□□□□ -0.31
BRD3-201ENST00000303407 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 ZNF688P0C7X2 276 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 PDE6HQ13956 83 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 C11orf53Q8IXP5 236 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 FAM110DQ8TAY7 271 aaPredicted RBP13.14□□□□□ -0.31
BRD3-201ENST00000303407 AMN1Q8IY45 258 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 NDUFB8O95169 186 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
BRD3-201ENST00000303407 HSD52Q0P140 79 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 DEFB104AQ8WTQ1 72 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 C2orf16Q68DN1 1984 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms