RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RPL7P18124 248 aaKnown RBP15.13■□□□□ 0.01
HOXC4-201ENST00000303406 RAB9AP51151 201 aa15.13■□□□□ 0.01
HOXC4-201ENST00000303406 LRRC75A-AS1Q8N1F1 130 aa15.13■□□□□ 0.01
HOXC4-201ENST00000303406 NRGNQ92686 78 aa15.13■□□□□ 0.01
HOXC4-201ENST00000303406 GRAMD2BQ96HH9 432 aa15.13■□□□□ 0.01
HOXC4-201ENST00000303406 FAM223BA6NKX1 122 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 GATCO43716 136 aaKnown RBP15.12■□□□□ 0.01
HOXC4-201ENST00000303406 SNRPCP09234 159 aaKnown RBP15.12■□□□□ 0.01
HOXC4-201ENST00000303406 LOXL1Q08397 574 aaPredicted RBP15.12■□□□□ 0.01
HOXC4-201ENST00000303406 TMEM219Q86XT9 240 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 FAM223AQ8IWN6 122 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 TMEM183AQ8IXX5 376 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 C12orf57Q99622 126 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 USP9XQ93008 2570 aaPredicted RBP15.12■□□□□ 0.01
HOXC4-201ENST00000303406 AKAP6Q13023 2319 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 SERTM2A0A1B0GWG4 89 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 LINC01548A6NM66 108 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 ZNF705GA8MUZ8 300 aaPredicted RBP15.12■□□□□ 0.01
HOXC4-201ENST00000303406 G3V318 75 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 ZNF253O75346 499 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 IGHV3-23P01764 117 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 TMEM75Q8N9X5 138 aa15.12■□□□□ 0.01
HOXC4-201ENST00000303406 IFITM10A6NMD0 228 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 H3BTX0 84 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 IGHG2P01859 326 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 MT-ND6P03923 174 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 PSG9Q00887 426 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 CT83Q5H943 113 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 WDR73Q6P4I2 378 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 Q86TA4 180 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 OR8I2Q8N0Y5 310 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 NUDT10Q8NFP7 164 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 NUDT11Q96G61 164 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 GNB1LQ9BYB4 327 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 ZFAND3Q9H8U3 227 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 ZNF580Q9UK33 172 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 MED13LQ71F56 2210 aa15.11■□□□□ 0.01
HOXC4-201ENST00000303406 IZUMO1RA6ND01 250 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 H3BUX3 64 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 K7EQM0 130 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 S100A2P29034 98 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 GPR183P32249 361 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 RASL11AQ6T310 242 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 EXOC3-AS1Q8N2X6 119 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 NHLRC2Q8NBF2 726 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 CCDC140Q96MF4 163 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 RPH3ALQ9UNE2 315 aa15.1■□□□□ 0.01
HOXC4-201ENST00000303406 A1L4Q6 167 aa15.09■□□□□ 0.01
HOXC4-201ENST00000303406 SH2D7A6NKC9 451 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-201ENST00000303406 CLEC3BP05452 202 aa15.09■□□□□ 0.01
HOXC4-201ENST00000303406 ATP5G2Q06055 141 aa15.09■□□□□ 0.01
HOXC4-201ENST00000303406 TOMM20LQ6UXN7 152 aa15.09■□□□□ 0.01
HOXC4-201ENST00000303406 SERTAD4Q9NUC0 356 aa15.09■□□□□ 0.01
HOXC4-201ENST00000303406 XKRY2A2RUG3 117 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 C19orf71A6NCJ1 209 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 FBLL1A6NHQ2 334 aaKnown RBP15.08■□□□□ 0.01
HOXC4-201ENST00000303406 AVPP01185 164 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 IGLV2-11P01706 119 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 RELQ04864 619 aaPredicted RBP15.08■□□□□ 0.01
HOXC4-201ENST00000303406 BCL6BQ8N143 479 aaPredicted RBP15.08■□□□□ 0.01
HOXC4-201ENST00000303406 PRSS22Q9GZN4 317 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 AAMDCQ9H7C9 122 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 ZFP30Q9Y2G7 519 aa15.08■□□□□ 0.01
HOXC4-201ENST00000303406 ABCA1O95477 2261 aa15.08■□□□□ 0
HOXC4-201ENST00000303406 GOLT1AQ6ZVE7 132 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 TSKUQ8WUA8 353 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 C17orf77Q96MU5 243 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 GPR61Q9BZJ8 451 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 A0A087X0K7 114 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 DIRC3C9JPN6 131 aa15.07■□□□□ 0
HOXC4-201ENST00000303406 WIPF2Q8TF74 440 aaPredicted RBP15.07■□□□□ 0
HOXC4-201ENST00000303406 TACC2O95359 2948 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 DEFB113Q30KQ7 82 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 C1orf194Q5T5A4 169 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 GFI1BQ5VTD9 330 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 CLEC19AQ6UXS0 136 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 OR4B1Q8NGF8 309 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 USMG5Q96IX5 58 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 MRPL18Q9H0U6 180 aaKnown RBP15.06■□□□□ 0
HOXC4-201ENST00000303406 RPP21Q9H633 154 aaKnown RBP15.06■□□□□ 0
HOXC4-201ENST00000303406 NAT8BQ9UHF3 227 aa15.06■□□□□ 0
HOXC4-201ENST00000303406 FAM231BA6NCW3 169 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 NPIPB6E9PJ23 425 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 CBLN1P23435 193 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 PPIFP30405 207 aaKnown RBP15.05■□□□□ -0
HOXC4-201ENST00000303406 CSN1S1P47710 185 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 LY6EQ16553 131 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 PSG3Q16557 428 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 GFRA4Q9GZZ7 299 aa15.05■□□□□ -0
HOXC4-201ENST00000303406 UBR5O95071 2799 aaPredicted RBP15.04■□□□□ -0
HOXC4-201ENST00000303406 SNURFLB1AK76 121 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 IER3P46695 156 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 C9orf152Q5JTZ5 239 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 PRR27Q6MZM9 219 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 TMEM136Q6ZRR5 245 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 ATP5L2Q7Z4Y8 100 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 MS4A10Q96PG2 267 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 PSG8Q9UQ74 426 aa15.04■□□□□ -0
HOXC4-201ENST00000303406 SOX21Q9Y651 276 aaPredicted RBP15.04■□□□□ -0
HOXC4-201ENST00000303406 ZNF462Q96JM2 2506 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms