RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 KLF2Q9Y5W3 355 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-201ENST00000299267 CKS2P33552 79 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 REV3LO60673 3130 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 FAM71F2Q6NXP2 309 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 KLK15Q9H2R5 256 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 TUBA4BQ9H853 241 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 SDF2L1Q9HCN8 221 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.12□□□□□ -1.11
GABRB3-201ENST00000299267 GZMBP10144 247 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 GATA3P23771 443 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 Q8N7P7 452 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 GPR82Q96P67 336 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 PROP1O75360 226 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 SAP30O75446 220 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 FNDC4Q9H6D8 234 aaPredicted RBP8.12□□□□□ -1.11
GABRB3-201ENST00000299267 CFAP46Q8IYW2 2715 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 AKAP13Q12802 2813 aa8.12□□□□□ -1.11
GABRB3-201ENST00000299267 C9JQL5 133 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 OR8A1Q8NGG7 326 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
GABRB3-201ENST00000299267 SRIP30626 198 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
GABRB3-201ENST00000299267 RRN3P1Q2M238 152 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 SAPCD1Q5SSQ6 148 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 TRGV9Q99603 122 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
GABRB3-201ENST00000299267 COL4A2P08572 1712 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 FXYD7P58549 80 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 TCF23Q7RTU1 214 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 CIARTQ8N365 385 aaPredicted RBP8.11□□□□□ -1.11
GABRB3-201ENST00000299267 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 RHPN1-AS1Q9BWJ2 59 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 LYL1P12980 280 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 CD99P14209 185 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 PSG8Q9UQ74 426 aa8.11□□□□□ -1.11
GABRB3-201ENST00000299267 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 E7EUB6 86 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 FCN3O75636 299 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 ZNF841Q6ZN19 808 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 ATG101Q9BSB4 218 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
GABRB3-201ENST00000299267 BCL6BQ8N143 479 aaPredicted RBP8.1□□□□□ -1.11
GABRB3-201ENST00000299267 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
GABRB3-201ENST00000299267 DEFA6Q01524 100 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 C1QL4Q86Z23 238 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 GOLT1BQ9Y3E0 138 aa8.1□□□□□ -1.11
GABRB3-201ENST00000299267 HIGD1CA8MV81 97 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 BTF3P20290 206 aaKnown RBP8.09□□□□□ -1.11
GABRB3-201ENST00000299267 IL15RAQ13261 267 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 GPR61Q9BZJ8 451 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 PEMTQ9UBM1 199 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 IGLV2-14P01704 120 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 FAM162BQ5T6X4 162 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 RNF182Q8N6D2 247 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 TNRC18O15417 2968 aaPredicted RBP8.09□□□□□ -1.11
GABRB3-201ENST00000299267 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 WFDC11Q8NEX6 87 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 LINC01587Q99440 93 aa8.09□□□□□ -1.11
GABRB3-201ENST00000299267 PEF1Q9UBV8 284 aaKnown RBP8.09□□□□□ -1.11
GABRB3-201ENST00000299267 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
GABRB3-201ENST00000299267 TRGC1P0CF51 173 aa8.09□□□□□ -1.12
GABRB3-201ENST00000299267 TSPOP30536 169 aa8.09□□□□□ -1.12
GABRB3-201ENST00000299267 LMO4P61968 165 aa8.09□□□□□ -1.12
GABRB3-201ENST00000299267 OR11H6Q8NGC7 330 aa8.09□□□□□ -1.12
GABRB3-201ENST00000299267 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.12
GABRB3-201ENST00000299267 BBC3Q96PG8 261 aaPredicted RBP8.09□□□□□ -1.12
GABRB3-201ENST00000299267 SPOCK3Q9BQ16 436 aa8.09□□□□□ -1.12
GABRB3-201ENST00000299267 IGLC7A0M8Q6 106 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 IGLV1-47P01700 117 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 CD5P06127 495 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 HTN3P15516 51 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 SPTBN5Q9NRC6 3674 aaKnown RBP8.08□□□□□ -1.12
GABRB3-201ENST00000299267 CBY3A6NI87 242 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 TCAPO15273 167 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 CD7P09564 240 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
GABRB3-201ENST00000299267 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 TRBV7-1A0A0A6YYK4 115 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 ZNF56Q15929 161 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
GABRB3-201ENST00000299267 F8P00451 2351 aa8.07□□□□□ -1.12
GABRB3-201ENST00000299267 ZNF726P1Q15940 193 aa8.07□□□□□ -1.12
GABRB3-201ENST00000299267 FAM110DQ8TAY7 271 aaPredicted RBP8.07□□□□□ -1.12
GABRB3-201ENST00000299267 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
GABRB3-201ENST00000299267 A0A1W2PPR1 153 aa8.07□□□□□ -1.12
GABRB3-201ENST00000299267 PAX1P15863 534 aa8.07□□□□□ -1.12
GABRB3-201ENST00000299267 NUTF2P61970 127 aaKnown RBP8.07□□□□□ -1.12
GABRB3-201ENST00000299267 ACTL10Q5JWF8 245 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms