RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.8□□□□□ -0.68
SKA3-201ENST00000298260 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 OVOL3O00110 214 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 CT45A6P0DMU7 189 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 CT45A5P0DMU8 189 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 CT45A7P0DMV0 189 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 HOXC12P31275 282 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 WT1-ASQ06250 92 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 ETDBQ3ZM63 59 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 C2orf83Q53S99 150 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 FAM173AQ9BQD7 235 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 INO80CQ6PI98 192 aaPredicted RBP10.8□□□□□ -0.68
SKA3-201ENST00000298260 LCNL1Q6ZST4 164 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 ZADH2Q8N4Q0 377 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 C19orf24Q9BVV8 132 aa10.8□□□□□ -0.68
SKA3-201ENST00000298260 HCP5Q6MZN7 132 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 GOLT1AQ6ZVE7 132 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
SKA3-201ENST00000298260 ATP6V0BQ99437 205 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 DUSP23Q9BVJ7 150 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 APOBEC3AP31941 199 aaPredicted RBP10.79□□□□□ -0.68
SKA3-201ENST00000298260 CSN1S1P47710 185 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 Q9H3A6 140 aa10.79□□□□□ -0.68
SKA3-201ENST00000298260 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 D6R8Y8 96 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 TCRAP04437 139 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 PPIFP30405 207 aaKnown RBP10.78□□□□□ -0.68
SKA3-201ENST00000298260 CR1LQ2VPA4 569 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 GCSAMQ8N6F7 178 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 NHP2Q9NX24 153 aaKnown RBP10.78□□□□□ -0.68
SKA3-201ENST00000298260 SIGLEC8Q9NYZ4 499 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 B4GALT7Q9UBV7 327 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 H3BMG7 143 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 DIAPH2-AS1Q14236 149 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 MOGAT3Q86VF5 341 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 OR5A1Q8NGJ0 315 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
SKA3-201ENST00000298260 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.68
SKA3-201ENST00000298260 KIR2DS2P43631 304 aa10.77□□□□□ -0.68
SKA3-201ENST00000298260 CKS1BP61024 79 aa10.77□□□□□ -0.68
SKA3-201ENST00000298260 CNEP1R1Q8N9A8 125 aa10.77□□□□□ -0.68
SKA3-201ENST00000298260 C16orf97H3BN30 126 aa10.77□□□□□ -0.69
SKA3-201ENST00000298260 DLL1O00548 723 aa10.77□□□□□ -0.69
SKA3-201ENST00000298260 SMIM13P0DJ93 91 aa10.77□□□□□ -0.69
SKA3-201ENST00000298260 AMN1Q8IY45 258 aa10.77□□□□□ -0.69
SKA3-201ENST00000298260 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
SKA3-201ENST00000298260 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 TCRBV4S1A1TA0A5B7 111 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 CRYBA4P53673 196 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 HARBI1Q96MB7 349 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 C17orf77Q96MU5 243 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 SPAG8Q99932 426 aaPredicted RBP10.76□□□□□ -0.69
SKA3-201ENST00000298260 TPSG1Q9NRR2 321 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 ACACAQ13085 2346 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 A0A1B0GV72 72 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 CGB1A6NKQ9 187 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 CD300EQ496F6 205 aaPredicted RBP10.76□□□□□ -0.69
SKA3-201ENST00000298260 MRPL20Q9BYC9 149 aaKnown RBP10.76□□□□□ -0.69
SKA3-201ENST00000298260 HAX1O00165 279 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 OR1L8Q8NGR8 309 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 SPRR3Q9UBC9 169 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
SKA3-201ENST00000298260 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
SKA3-201ENST00000298260 CECR9P0C854 216 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 MEOX1P50221 254 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 Q86TA4 180 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 OR5AN1Q8NGI8 311 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 ZNF414Q96IQ9 312 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 VGLL1Q99990 258 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 NDUFA4L2Q9NRX3 87 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 SPANXB1Q9NS25 103 aaPredicted RBP10.75□□□□□ -0.69
SKA3-201ENST00000298260 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 SPRY3O43610 288 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
SKA3-201ENST00000298260 ADGRG4Q8IZF6 3080 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 GAS8-AS1O95177 125 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 ERHP84090 104 aaKnown RBP10.74□□□□□ -0.69
SKA3-201ENST00000298260 FAM216BQ8N7L0 139 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 POLEQ07864 2286 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 APC2O95996 2303 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 KBTBD11-OT1A0A1B0GTJ5 212 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 IGLV2-11P01706 119 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 FTH1P19P0C7X4 201 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 CGB3P0DN86 165 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 CGB7P0DN87 165 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 PRB3Q04118 309 aaPredicted RBP10.74□□□□□ -0.69
SKA3-201ENST00000298260 STXBP6Q8NFX7 210 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 RITA1Q96K30 269 aa10.74□□□□□ -0.69
SKA3-201ENST00000298260 NPIPB6E9PJ23 425 aa10.73□□□□□ -0.69
SKA3-201ENST00000298260 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
SKA3-201ENST00000298260 CCL13Q99616 98 aa10.73□□□□□ -0.69
SKA3-201ENST00000298260 IGF2RP11717 2491 aa10.73□□□□□ -0.69
SKA3-201ENST00000298260 SCGB2A2Q13296 93 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms