RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 OR4X2Q8NGF9 303 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 SMCO4Q9NRQ5 59 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 DNAJC9-AS1A6NH13 148 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 IGLC2P0DOY2 106 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 TRBV20OR9-2A0A075B6H5 130 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 CLPSL1A2RUU4 121 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 C2CD4CQ8TF44 421 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 ANK3Q12955 4377 aaKnown RBP17.62■□□□□ 0.41
PTX3-201ENST00000295927 NOTCH2Q04721 2471 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 PGPA6NDG6 321 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 RPL35P42766 123 aaKnown RBP17.61■□□□□ 0.41
PTX3-201ENST00000295927 SLC35B1P78383 322 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 TMEM160Q9NX00 188 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 A0A087WWC5 75 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 S100A7P31151 101 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 RPL15P61313 204 aaKnown RBP17.6■□□□□ 0.41
PTX3-201ENST00000295927 C17orf77Q96MU5 243 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 Q9H3A6 140 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 ESM1Q9NQ30 184 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 RNF24Q9Y225 148 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 TRBV19A0A075B6N1 114 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 TEX38Q6PEX7 206 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 HELTA6NFD8 242 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 PGPEP1LA6NFU8 196 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 SLC25A5P05141 298 aaKnown RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 LINC01551Q86U37 167 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 FAM181BA6NEQ2 426 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 RPL7P18124 248 aaKnown RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 OR8I2Q8N0Y5 310 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 TCEAL7Q9BRU2 100 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 SERTAD4Q9NUC0 356 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 AURKAIP1Q9NWT8 199 aaPredicted RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 PEX7O00628 323 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 LY6G6DO95868 133 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 RPLP1P05386 114 aaKnown RBP17.58■□□□□ 0.4
PTX3-201ENST00000295927 GNG5P63218 68 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 FOXE3Q13461 319 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 METTL26Q96S19 204 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 EPDR1Q9UM22 224 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 C9JCJ5 164 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ZNF207O43670 478 aaKnown RBP17.57■□□□□ 0.4
PTX3-201ENST00000295927 SCGB2A2Q13296 93 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 RNF212Q495C1 297 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ISOC2Q96AB3 205 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OR5B12Q96R08 314 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TUBA4BQ9H853 241 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OTORQ9NRC9 128 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OTOGQ6ZRI0 2925 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 NDUFA4O00483 81 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TSPAN4O14817 238 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 BUB3O43684 328 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ELANEP08246 267 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 FAM209BQ5JX69 171 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OCC1Q8TAD7 63 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 HIST1H2BAQ96A08 127 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TMA7Q9Y2S6 64 aaKnown RBP17.57■□□□□ 0.4
PTX3-201ENST00000295927 EXOC3-AS1Q8N2X6 119 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 C5orf17Q8NAS9 161 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 LINC00479Q96M42 142 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 PEF1Q9UBV8 284 aaKnown RBP17.56■□□□□ 0.4
PTX3-201ENST00000295927 SMAD5-AS1Q9Y6J3 95 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 SLC17A3O00476 420 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 GGCTO75223 188 aaKnown RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 APOHP02749 345 aaPredicted RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 CENPWQ5EE01 88 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 UNQ9165/PRO28630Q6UXU0 137 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-66A0A0C4DH42 116 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 SRD5A1P18405 259 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 CNN1P51911 297 aaKnown RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 SIGLEC15Q6ZMC9 328 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 MYOZ3Q8TDC0 251 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 U3KQE9 123 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 MT-ND4LP03901 98 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 GNG4P50150 75 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 PDE6HQ13956 83 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 Q6ZSV7 163 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 LYPD1Q8N2G4 141 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 RPH3ALQ9UNE2 315 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3OR16-13A0A075B7E8 117 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-49A0A0A0MS15 119 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-74A0A0B4J1X5 117 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CLDN34H7C241 214 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 RNF152Q8N8N0 203 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CTDSP1Q9GZU7 261 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TMEM242Q9NWH2 141 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CDC42EP3Q9UKI2 254 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 PRELID1Q9Y255 219 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 LY96Q9Y6Y9 160 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TRAV34A0A0B4J273 112 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 COLCA2A8K830 154 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TAS2R60P59551 318 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 C1orf194Q5T5A4 169 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 C15orf54Q8N8G6 183 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGF2BP2-AS1Q96M15 143 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 ATG101Q9BSB4 218 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 K7EN84 100 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 TCRAP04437 139 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 ATF4P18848 351 aaPredicted RBP17.52■□□□□ 0.4
PTX3-201ENST00000295927 GPR82Q96P67 336 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 CMTM2Q8TAZ6 248 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms