RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RPL23P62829 140 aaKnown RBP14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 TOMM7Q9P0U1 55 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 LINC00477Q96M19 166 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 WFDC1Q9HC57 220 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 TRAV8-6A0A0B4J262 113 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 GRNP28799 593 aaKnown RBP14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 PLA2G5P39877 138 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 C18orf15Q96N68 181 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 RNASE7Q9H1E1 156 aaKnown RBP14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 SHISA9B4DS77 424 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 ZNF138P52744 262 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 PRADC1Q9BSG0 188 aa14.34□□□□□ -0.11
CDC42EP3-201ENST00000295324 CFPP27918 469 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 MGST2Q99735 147 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 HELZP42694 1942 aaKnown RBP14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 PPBPP02775 128 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 DEFB113Q30KQ7 82 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 OR9G4Q8NGQ1 327 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 VGLL1Q99990 258 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 NPIPB5A8MRT5 1133 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 MALP21145 153 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 TP53BP1Q12888 1972 aaPredicted RBP14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 HEATR5AQ86XA9 2040 aa14.33□□□□□ -0.12
CDC42EP3-201ENST00000295324 A0A1B0GWB2 263 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 FCN3O75636 299 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 JKAMPQ9P055 326 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 A0A1W2PPI3 338 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 TTC9CQ8N5M4 171 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 SPRY4Q9C004 299 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 IGKV2-40A0A087WW87 121 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 SRRM4A7MD48 611 aaKnown RBP14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 IGKV2D-40P01614 121 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 RCHY1Q96PM5 261 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 A0A087WWC5 75 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 ZNF415Q09FC8 603 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 ZNRD1Q9P1U0 126 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 LINC01619G3V211 115 aa14.32□□□□□ -0.12
CDC42EP3-201ENST00000295324 PPIFP30405 207 aaKnown RBP14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 IFI27P40305 119 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 ZNF833PQ6ZTB9 187 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 CHCHD5Q9BSY4 110 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 LYPD1Q8N2G4 141 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 EXOC3-AS1Q8N2X6 119 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 INSP01308 110 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 MALRD1Q5VYJ5 2156 aa14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP3-201ENST00000295324 IGKV1-6A0A0C4DH72 117 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 C17orf58Q2M2W7 97 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 VSIRQ9H7M9 311 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 C15orf62A8K5M9 175 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 DKK1O94907 266 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 RSPO1Q2MKA7 263 aaPredicted RBP14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 NIT1Q86X76 327 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 DUX4L9Q6RFH8 374 aaPredicted RBP14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 RNF138Q8WVD3 245 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 C1orf122Q6ZSJ8 110 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 C14orf144Q96I85 54 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 VCX2Q9H322 139 aa14.3□□□□□ -0.12
CDC42EP3-201ENST00000295324 A0A087WX48 190 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 FGF16O43320 207 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 SPATA31B1PQ5VZV4 182 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 SEPSECSQ9HD40 501 aaKnown RBP14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 IGHV2-5P01817 119 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 TCRAP04437 139 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 A0A1W2PNU3 283 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 NDUFS7O75251 213 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 OCC1Q8TAD7 63 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 DKK4Q9UBT3 224 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 TRGV1A0A0A0MS02 117 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 HOXA5P20719 270 aa14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 MCRIP2Q9BUT9 160 aaKnown RBP14.29□□□□□ -0.12
CDC42EP3-201ENST00000295324 IMMP2LQ96T52 175 aa14.28□□□□□ -0.12
CDC42EP3-201ENST00000295324 RSPO3Q9BXY4 272 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP3-201ENST00000295324 UBE2E2Q96LR5 201 aa14.28□□□□□ -0.12
CDC42EP3-201ENST00000295324 NRN1Q9NPD7 142 aa14.28□□□□□ -0.12
CDC42EP3-201ENST00000295324 NDUFB8O95169 186 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 TCF23Q7RTU1 214 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 FOXC2Q99958 501 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 SPG11Q96JI7 2443 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 SNAI2O43623 268 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 TSKUQ8WUA8 353 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 AGMATQ9BSE5 352 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 NXT2Q9NPJ8 142 aaKnown RBP14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 SPCS1Q9Y6A9 102 aa14.27□□□□□ -0.12
CDC42EP3-201ENST00000295324 TRAV12-3A0A0B4J271 114 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 G3V318 75 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 IL17RELQ6ZVW7 336 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 CYSLTR1Q9Y271 337 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 TRAV1-1A0A0B4J248 108 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 DEFB131AP59861 70 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 NUDT10Q8NFP7 164 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 NUDT11Q96G61 164 aa14.27□□□□□ -0.13
CDC42EP3-201ENST00000295324 YLPM1P49750 1951 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms