RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 BAGE2Q86Y30 109 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 VN1R17PQ8TDU5 208 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 TMEM190Q8WZ59 177 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 ATG101Q9BSB4 218 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 Q9H3A6 140 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 PHOX2AO14813 284 aa7.15□□□□□ -1.26
PDPN-201ENST00000294489 IGLV2-8P01709 118 aa7.15□□□□□ -1.26
PDPN-201ENST00000294489 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
PDPN-201ENST00000294489 IBA57Q5T440 356 aaKnown RBP7.15□□□□□ -1.26
PDPN-201ENST00000294489 OR2T8A6NH00 312 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 RNF223E7ERA6 249 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 F8W735 103 aaPredicted RBP7.15□□□□□ -1.27
PDPN-201ENST00000294489 BRI3O95415 125 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 S100A7P31151 101 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.27
PDPN-201ENST00000294489 GNG5P63218 68 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 CMTM2Q8TAZ6 248 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.27
PDPN-201ENST00000294489 OTORQ9NRC9 128 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 RPH3ALQ9UNE2 315 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 V9GYV3 84 aa7.15□□□□□ -1.27
PDPN-201ENST00000294489 TRBV9A0A0B4J1U6 114 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 H3BTX0 84 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 IGHV3-23P01764 117 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 C15orf32Q32M92 178 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 ACTL10Q5JWF8 245 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 TMEM219Q86XT9 240 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 ZNF586Q9NXT0 402 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 GAR1Q9NY12 217 aaKnown RBP7.14□□□□□ -1.27
PDPN-201ENST00000294489 ZNF98A6NK75 572 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 USF2Q15853 346 aaPredicted RBP7.14□□□□□ -1.27
PDPN-201ENST00000294489 FMC1Q96HJ9 113 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 SERTAD4Q9NUC0 356 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 ZNF580Q9UK33 172 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 PITPNC1Q9UKF7 332 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 KLF12Q9Y4X4 402 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 USP9YO00507 2555 aaPredicted RBP7.14□□□□□ -1.27
PDPN-201ENST00000294489 LRRK2Q5S007 2527 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 ANKRD17O75179 2603 aaKnown RBP7.14□□□□□ -1.27
PDPN-201ENST00000294489 J3KRW8 73 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 TCRAP04437 139 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 MEOX2P50222 304 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 RHOGP84095 191 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 NHLRC2Q8NBF2 726 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 GPR82Q96P67 336 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 C12orf57Q99622 126 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 PRDM13Q9H4Q3 707 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 TRAPPC1Q9Y5R8 145 aa7.14□□□□□ -1.27
PDPN-201ENST00000294489 SOX21Q9Y651 276 aaPredicted RBP7.14□□□□□ -1.27
PDPN-201ENST00000294489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDPN-201ENST00000294489 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
PDPN-201ENST00000294489 CTSGP08311 255 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 CHRDL1Q9BU40 450 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 CSMD2Q7Z408 3487 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 SPG11Q96JI7 2443 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 FAM208BQ5VWN6 2430 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 SH2D7A6NKC9 451 aaPredicted RBP7.13□□□□□ -1.27
PDPN-201ENST00000294489 G3V318 75 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 M0QZK8 103 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 IGF1P05019 195 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 S100A2P29034 98 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 Q96MF0 132 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 APCP25054 2843 aa7.13□□□□□ -1.27
PDPN-201ENST00000294489 BMPR1BO00238 502 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 SMIM6P0DI80 62 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 IGLC2P0DOY2 106 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 GPR183P32249 361 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 OR8I2Q8N0Y5 310 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 ZNF414Q96IQ9 312 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 RABAC1Q9UI14 185 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 TGFAP01135 160 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 RPL15P61313 204 aaKnown RBP7.12□□□□□ -1.27
PDPN-201ENST00000294489 EXOC3-AS1Q8N2X6 119 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 EEF1AKMT3Q96AZ1 226 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 ATP6V0BQ99437 205 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 TRAV41A0A0B4J266 112 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 K7EQM0 130 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 GATCO43716 136 aaKnown RBP7.12□□□□□ -1.27
PDPN-201ENST00000294489 IGHG2P01859 326 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 CLEC3BP05452 202 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 RPL7P18124 248 aaKnown RBP7.12□□□□□ -1.27
PDPN-201ENST00000294489 PDE6HQ13956 83 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 C9orf152Q5JTZ5 239 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 CYB5R2Q6BCY4 276 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 PRR27Q6MZM9 219 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 SGK494Q96LW2 274 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 PDZD2O15018 2839 aa7.12□□□□□ -1.27
PDPN-201ENST00000294489 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 XKRY2A2RUG3 117 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 H3BUX3 64 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 ADMP35318 185 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 HIST2H2BCQ6DN03 193 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms