RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TGFAP01135 160 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 GPR183P32249 361 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 RPL15P61313 204 aaKnown RBP7.46□□□□□ -1.22
TRIM55-201ENST00000276573 IBA57Q5T440 356 aaKnown RBP7.46□□□□□ -1.22
TRIM55-201ENST00000276573 LRRC75A-AS1Q8N1F1 130 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 EXOC3-AS1Q8N2X6 119 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 NHLRC2Q8NBF2 726 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 TMEM190Q8WZ59 177 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 RABAC1Q9UI14 185 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 LINC00527Q9UJ94 153 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 PITPNC1Q9UKF7 332 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 RPH3ALQ9UNE2 315 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 RNF223E7ERA6 249 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 M0QZK8 103 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 IGHG2P01859 326 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 IGF1P05019 195 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 ATP5G2Q06055 141 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 TOMM20LQ6UXN7 152 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 CLEC19AQ6UXS0 136 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 SIGLEC15Q6ZMC9 328 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 MAPK1IP1LQ8NDC0 245 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 SMIM12Q96EX1 92 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 FMC1Q96HJ9 113 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 SGK494Q96LW2 274 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 GPR82Q96P67 336 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 MLST8Q9BVC4 326 aa7.45□□□□□ -1.22
TRIM55-201ENST00000276573 BMPR1BO00238 502 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 CDX1P47902 265 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-201ENST00000276573 BLCAPP62952 87 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 ACTL10Q5JWF8 245 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 CMTM2Q8TAZ6 248 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 SERTAD4Q9NUC0 356 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
TRIM55-201ENST00000276573 BRI3O95415 125 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 LTAP01374 205 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 S100A7P31151 101 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 OR8I2Q8N0Y5 310 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
TRIM55-201ENST00000276573 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 SMIM27A0A1W2PRY6 76 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 FAM223BA6NKX1 122 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 ZNF705GA8MUZ8 300 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-201ENST00000276573 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 RPL7P18124 248 aaKnown RBP7.43□□□□□ -1.22
TRIM55-201ENST00000276573 PPIFP30405 207 aaKnown RBP7.43□□□□□ -1.22
TRIM55-201ENST00000276573 PDE6HQ13956 83 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 DEFB112Q30KQ8 113 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 FAM223AQ8IWN6 122 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 SMAD5-AS1Q9Y6J3 95 aa7.43□□□□□ -1.22
TRIM55-201ENST00000276573 IGHV3OR16-8A0A075B7F1 116 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 TRGV3P03979 118 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 S100A8P05109 93 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 Q6ZS46 218 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 GOLT1AQ6ZVE7 132 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 GRAMD2BQ96HH9 432 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 NOL4LQ96MY1 436 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-201ENST00000276573 GNB4Q9HAV0 340 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 H3BUA1 57 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 PSG9Q00887 426 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 Q5PR19 223 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 GFI1BQ5VTD9 330 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 PRR27Q6MZM9 219 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 TMEM183AQ8IXX5 376 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 AAMDCQ9H7C9 122 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 ZNF492Q9P255 531 aa7.42□□□□□ -1.22
TRIM55-201ENST00000276573 FBN2P35556 2912 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 CLPSL1A2RUU4 121 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 IZUMO1RA6ND01 250 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 DIRC3C9JPN6 131 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 BUB3O43684 328 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 FSHBP01225 129 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 FRMD6-AS1P0C7T7 363 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 RAB9AP51151 201 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 TPPP2P59282 170 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 RPL19P84098 196 aaKnown RBP7.41□□□□□ -1.22
TRIM55-201ENST00000276573 RELQ04864 619 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-201ENST00000276573 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
TRIM55-201ENST00000276573 PRSS57Q6UWY2 283 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 LINC00322Q6ZN03 302 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-201ENST00000276573 PRNTQ86SH4 94 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 ARL6IP6Q8N6S5 226 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 USMG5Q96IX5 58 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 PRSS22Q9GZN4 317 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 FAM208BQ5VWN6 2430 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
TRIM55-201ENST00000276573 XKRY2A2RUG3 117 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 C19orf71A6NCJ1 209 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms