RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 HAPLN4Q86UW8 402 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 NUP214P35658 2090 aaPredicted RBP7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 RNASE2P10153 161 aaKnown RBP7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 CDKN1AP38936 164 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 Q8TAT8 98 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 LAMB2P55268 1798 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV3-73A0A0B4J1V6 119 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 TCTEX1D4Q5JR98 221 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 TMEM200BQ69YZ2 307 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 TP53TG1Q9Y2A0 90 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 KIF13BQ9NQT8 1826 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 IGKV1-27A0A075B6S5 117 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 SMKR1H3BMG3 65 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHG4P01861 327 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 SLC25A16P16260 332 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 CSRP2Q16527 193 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 MST1LQ2TV78 715 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 QRFPP83859 136 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 TRAV3A0A0B4J244 114 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 ARMS2P0C7Q2 107 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 CD24P25063 80 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 CFPP27918 469 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 STRCP1A6NGW2 1772 aa7.09□□□□□ -1.27
SCUBE3-201ENST00000274938 NDUFB8O95169 186 aa7.09□□□□□ -1.28
SCUBE3-201ENST00000274938 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.28
SCUBE3-201ENST00000274938 I3L3M4 83 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 CD177Q8N6Q3 437 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 E9PLN8 166 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 CFHR1Q03591 330 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 VMO1Q7Z5L0 202 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 PRB1P04280 392 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 SIGLEC9Q9Y336 463 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 ARHGEF17Q96PE2 2063 aaPredicted RBP7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 ZNFX1Q9P2E3 1918 aaKnown RBP7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 SCN8AQ9UQD0 1980 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 SAP30O75446 220 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 TFF1P04155 84 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 ANKRD29Q8N6D5 301 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 PSPNO60542 156 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 FGF6P10767 208 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 BRWD1Q9NSI6 2320 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 ACYP1P07311 99 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 NPSP0C0P6 89 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 Q6P435 159 aa7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 RNF166Q96A37 237 aaPredicted RBP7.08□□□□□ -1.28
SCUBE3-201ENST00000274938 TMEM178BH3BS89 294 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 HAMPP81172 84 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 CEND1Q8N111 149 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 FGFBP3Q8TAT2 258 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 HLA-DRB4P13762 266 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 ZCCHC24Q8N2G6 241 aaKnown RBP7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 LINC00473A8K010 186 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 EFNA4P52798 201 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 ZNF831Q5JPB2 1677 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 FLVCR1-AS1Q8TAF5 88 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 IGHG3P01860 377 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 DAZ1Q9NQZ3 744 aaKnown RBP7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 LTBP4Q8N2S1 1624 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 A0A087WWL8 130 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 BUB1B-PAK6H3BSN5 160 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 SCN3AQ9NY46 2000 aa7.07□□□□□ -1.28
SCUBE3-201ENST00000274938 GAFA1Q96PS6 74 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 MCRIP2Q9BUT9 160 aaKnown RBP7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 CRLF1O75462 422 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 GAGE5Q13069 117 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 GAGE6Q13070 117 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 Q6ZWC4 215 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 PNRC2Q9NPJ4 139 aaKnown RBP7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 NTN3O00634 580 aaPredicted RBP7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 IGHV3-53P01767 116 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 SMIM27A0A1W2PRY6 76 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 CEACAM8P31997 349 aaPredicted RBP7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 FOCADQ5VW36 1801 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 TMEM213A2RRL7 107 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 NDUFC2O95298 119 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 AZU1P20160 251 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms