RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SIT1Q9Y3P8 196 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 LINC00473A8K010 186 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 HOXA3O43365 443 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 PEAR1Q5VY43 1037 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 MORN5Q5VZ52 161 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF329Q86UD4 541 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 MLST8Q9BVC4 326 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 PRRG4Q9BZD6 226 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 GFRA4Q9GZZ7 299 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ADAMTS20P59510 1910 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 OVOL3O00110 214 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 DUX1O43812 170 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ASIPP42127 132 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 GNG5P63218 68 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 KLF17Q5JT82 389 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ANKRD29Q8N6D5 301 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF441Q8N8Z8 693 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 OR10J6PQ8NGY7 276 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 ZMAT4Q9H898 229 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 KNTC1P50748 2209 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 CACNA1EQ15878 2313 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 PI4KAP42356 2102 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 C19orf71A6NCJ1 209 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 HBDP02042 147 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 IL4P05112 153 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 UBE2L3P68036 154 aaKnown RBP7.38□□□□□ -1.23
PDGFC-201ENST00000274071 FAM167A-AS1Q96KT0 104 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 FZR1Q9UM11 496 aa7.38□□□□□ -1.23
PDGFC-201ENST00000274071 IGKV1OR2-108A0A075B7D4 117 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 CFIP05156 583 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 CELA2AP08217 269 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 PAX8Q06710 450 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 SPRNQ5BIV9 151 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 PSMG4Q5JS54 123 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 HES3Q5TGS1 186 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 WDR31Q8NA23 367 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 ENY2Q9NPA8 101 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 IGKV3D-11A0A0A0MRZ8 115 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 TRAV8-2A0A0B4J237 113 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 A8MWV9 139 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF32P17041 273 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 ITLN1Q8WWA0 313 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 RAXQ9Y2V3 346 aa7.37□□□□□ -1.23
PDGFC-201ENST00000274071 TRBV7-3A0A075B6L6 115 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 A0A1W2PPI3 338 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 C9JAW5 83 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 PYYP10082 97 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 KIR2DS2P43631 304 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 LINC00596Q86U02 117 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 RFESDQ8TAC1 157 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 FAM173AQ9BQD7 235 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 SLC25A2Q9BXI2 301 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 HIGD1AQ9Y241 93 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 COL5A1P20908 1838 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-201ENST00000274071 H3BVH4 76 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF497Q6ZNH5 498 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 OR1L4Q8NGR5 311 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 OBP2BQ9NPH6 170 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 KLRF1Q9NZS2 232 aa7.36□□□□□ -1.23
PDGFC-201ENST00000274071 IGHV3-15A0A0B4J1V0 119 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 TRAV3A0A0B4J244 114 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 DUTP33316 252 aaKnown RBP7.35□□□□□ -1.23
PDGFC-201ENST00000274071 MFAP4P55083 255 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 LINC01549A6NIU2 74 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 SHISA9B4DS77 424 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 ARMS2P0C7Q2 107 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 LY6DQ14210 128 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 SLC25A53Q5H9E4 307 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF474Q6S9Z5 364 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-201ENST00000274071 A0A1B0GUT8 65 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 NPFFO15130 113 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 ZNHIT1O43257 154 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 IGKCP01834 107 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 UBE2D3P61077 147 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 UBE2D2P62837 147 aa7.35□□□□□ -1.23
PDGFC-201ENST00000274071 TET2Q6N021 2002 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-201ENST00000274071 FER1L5A0AVI2 2057 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 TRAV8-1A0A0A6YYK1 113 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 OOSP1A8MZH6 123 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 D6R8Y8 96 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 DLL1O00548 723 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 TCL1BO95988 128 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 TBC1D28Q2M2D7 210 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 LRRC75A-AS1Q8N1F1 130 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms