RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 GREB1Q4ZG55 1949 aa11.05□□□□□ -0.64
PRDM16-201ENST00000270722 TRAV26-1A0A087WT03 109 aa11.05□□□□□ -0.64
PRDM16-201ENST00000270722 NDUFC2-KCTD14E9PQ53 114 aa11.05□□□□□ -0.64
PRDM16-201ENST00000270722 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
PRDM16-201ENST00000270722 RASL10AQ92737 203 aa11.05□□□□□ -0.64
PRDM16-201ENST00000270722 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 C1QTNF5Q9BXJ0 243 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 IGLV3-21P80748 117 aaPredicted RBP11.04□□□□□ -0.64
PRDM16-201ENST00000270722 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 H3BTX0 84 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 TIMP3P35625 211 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 H2BFSP57053 126 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 DTX4Q9Y2E6 619 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 NANOS3P60323 173 aaKnown RBP11.04□□□□□ -0.64
PRDM16-201ENST00000270722 RPRMLQ8N4K4 120 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 BAALCQ8WXS3 180 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 PRR13Q9NZ81 148 aa11.04□□□□□ -0.64
PRDM16-201ENST00000270722 CELA2AP08217 269 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 LYPD6BQ8NI32 183 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 DSCR8Q96T75 97 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 C1QL1O75973 258 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 TRBV5-7A0A0A0MS05 114 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 WFDC6Q9BQY6 131 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 RAMP1O60894 148 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 IGFBP6P24592 240 aaPredicted RBP11.03□□□□□ -0.64
PRDM16-201ENST00000270722 PAX4O43316 350 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 APOC4P55056 127 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
PRDM16-201ENST00000270722 SBF2Q86WG5 1849 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 IGHV2-70DA0A0C4DH43 119 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 M0R1W7 72 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 DAD1P61803 113 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 EIF4EBP2Q13542 120 aaPredicted RBP11.03□□□□□ -0.64
PRDM16-201ENST00000270722 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 GATD1Q8NB37 220 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
PRDM16-201ENST00000270722 H3BQ85 93 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 CFHR1Q03591 330 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 IGLV3-19P01714 112 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 TM2D1Q9BX74 207 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 PLXNA3P51805 1871 aa11.02□□□□□ -0.64
PRDM16-201ENST00000270722 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 A0A1W2PRE2 83 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 IGHV3-11P01762 117 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 PYYP10082 97 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 CTHRC1Q96CG8 243 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 A4D1N5 150 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 SIVA1O15304 175 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 C6orf226Q5I0X4 101 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 LCN12Q6JVE5 192 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.02□□□□□ -0.65
PRDM16-201ENST00000270722 LYL1P12980 280 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 SPINK2P20155 84 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 LINC00477Q96M19 166 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 PSME4Q14997 1843 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 TRAV40A0A0B4J280 105 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 FAM223BA6NKX1 122 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 FAM223AQ8IWN6 122 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 COL18A1P39060 1754 aa11.02□□□□□ -0.65
PRDM16-201ENST00000270722 RHODO00212 210 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 ATRAIDQ6UW56 229 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 CHCHD2Q9Y6H1 151 aaPredicted RBP11.01□□□□□ -0.65
PRDM16-201ENST00000270722 ERCC8Q13216 396 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 RPL39P5Q59GN2 51 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
PRDM16-201ENST00000270722 LEAP2Q969E1 77 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 TAF1LQ8IZX4 1826 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 PSPNO60542 156 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 RCHY1Q96PM5 261 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 LOC285556D6RIA3 1793 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 TIMM23O14925 209 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 CRIM1Q9NZV1 1036 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 C5orf66Q9H5L9 145 aa11.01□□□□□ -0.65
PRDM16-201ENST00000270722 TMEM187Q14656 261 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 ETDBQ3ZM63 59 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 LINC01551Q86U37 167 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 TSKUQ8WUA8 353 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 ZFYVE26Q68DK2 2539 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 SLC25A48Q6ZT89 311 aaKnown RBP11□□□□□ -0.65
PRDM16-201ENST00000270722 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 CELA3AP09093 270 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 TAL2Q16559 108 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms