RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 HIST1H1EP10412 219 aaKnown RBP11.91□□□□□ -0.5
COPS3-201ENST00000268717 GPR183P32249 361 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 MYCNOSP40205 109 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
COPS3-201ENST00000268717 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
COPS3-201ENST00000268717 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 SPATA3Q8NHX4 192 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 ZNF418Q8TF45 676 aaPredicted RBP11.91□□□□□ -0.5
COPS3-201ENST00000268717 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 CLEC3BP05452 202 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 RAB9AP51151 201 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.5
COPS3-201ENST00000268717 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
COPS3-201ENST00000268717 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.9□□□□□ -0.5
COPS3-201ENST00000268717 C2CD4CQ8TF44 421 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 ANK2Q01484 3957 aa11.9□□□□□ -0.5
COPS3-201ENST00000268717 ZNF98A6NK75 572 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 HILS1P60008 231 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 ZNF414Q96IQ9 312 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 A0A0G2JLM5 398 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 IGHG4P01861 327 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 TPPP2P59282 170 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 ADIRFQ15847 76 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 Q6ZS46 218 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 ZNF329Q86UD4 541 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 OR4F17Q8NGA8 305 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
COPS3-201ENST00000268717 DERL1Q9BUN8 251 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 PRSS22Q9GZN4 317 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 LINC00527Q9UJ94 153 aa11.89□□□□□ -0.51
COPS3-201ENST00000268717 MRPS12O15235 138 aaKnown RBP11.88□□□□□ -0.51
COPS3-201ENST00000268717 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
COPS3-201ENST00000268717 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 IGLC2P0DOY2 106 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 CRYBB3P26998 211 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 AKR1C3P42330 323 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 PDE6HQ13956 83 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 CLEC19AQ6UXS0 136 aa11.88□□□□□ -0.51
COPS3-201ENST00000268717 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.87□□□□□ -0.51
COPS3-201ENST00000268717 RPL7P18124 248 aaKnown RBP11.87□□□□□ -0.51
COPS3-201ENST00000268717 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
COPS3-201ENST00000268717 TAS2R60P59551 318 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 Q8N2B8 174 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 OTORQ9NRC9 128 aa11.87□□□□□ -0.51
COPS3-201ENST00000268717 HELTA6NFD8 242 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 COLCA2A8K830 154 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 CLDN34H7C241 214 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 RNF212Q495C1 297 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 C5orf17Q8NAS9 161 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 GPR82Q96P67 336 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 TRBV19A0A075B6N1 114 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 PEX7O00628 323 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
COPS3-201ENST00000268717 PSMB8P28062 276 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
COPS3-201ENST00000268717 SIGLECL1Q8N7X8 197 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 ESM1Q9NQ30 184 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 EPDR1Q9UM22 224 aa11.86□□□□□ -0.51
COPS3-201ENST00000268717 PPP1R2P9O14990 202 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 ZNF253O75346 499 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 PF4V1P10720 104 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
COPS3-201ENST00000268717 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 BLNKQ8WV28 456 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 SMIM12Q96EX1 92 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 Q9H3A6 140 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 GNB4Q9HAV0 340 aa11.85□□□□□ -0.51
COPS3-201ENST00000268717 PGPA6NDG6 321 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 NDUFA4O00483 81 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 FOLR2P14207 255 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 ARL3P36405 182 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 GNG4P50150 75 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 SLC35B1P78383 322 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
COPS3-201ENST00000268717 IGF2BP2-AS1Q96M15 143 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 TMA7Q9Y2S6 64 aaKnown RBP11.84□□□□□ -0.51
COPS3-201ENST00000268717 KLF12Q9Y4X4 402 aa11.84□□□□□ -0.51
COPS3-201ENST00000268717 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
COPS3-201ENST00000268717 ELANEP08246 267 aa11.83□□□□□ -0.52
COPS3-201ENST00000268717 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms