RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SP1P08047 785 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 SMIM13P0DJ93 91 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 KIR2DL2P43627 348 aaPredicted RBP7.08□□□□□ -1.28
VAPB-201ENST00000265619 WDR86Q86TI4 376 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 BCL6BQ8N143 479 aaPredicted RBP7.08□□□□□ -1.28
VAPB-201ENST00000265619 SYT8Q8NBV8 401 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 TNFRSF18Q9Y5U5 241 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 ADGRG4Q8IZF6 3080 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 FCGR3BO75015 233 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 CACNG7P62955 275 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 ZNF562Q6V9R5 426 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 ZNF418Q8TF45 676 aaPredicted RBP7.08□□□□□ -1.28
VAPB-201ENST00000265619 TM2D2Q9BX73 214 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
VAPB-201ENST00000265619 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 RELNP78509 3460 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 CACNA1AO00555 2505 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 FAM90A27PA6NNH2 459 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 OVOL3O00110 214 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 DKK1O94907 266 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 TMPRSS3P57727 454 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
VAPB-201ENST00000265619 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 FAM110AQ9BQ89 295 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
VAPB-201ENST00000265619 FOXF2Q12947 444 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 OR4A16Q8NH70 328 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 ERG28Q9UKR5 140 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 IGLV3-32A0A0A0MS00 114 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 TRAV25A0A0B4J276 109 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 PIGBOS1A0A0B4J2F0 54 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 GPR12P47775 334 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 PIP4P1Q86T03 277 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 OR9G1Q8NH87 305 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 SLC25A2Q9BXI2 301 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
VAPB-201ENST00000265619 AMMECR1Q9Y4X0 333 aaPredicted RBP7.07□□□□□ -1.28
VAPB-201ENST00000265619 KALRNO60229 2985 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 TM4SF5O14894 197 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 TAS2R45P59539 299 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 FAM231DQ6ZW35 169 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 FAM167A-AS1Q96KT0 104 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 UFC1Q9Y3C8 167 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 LOC389332A0A1B0GUA5 103 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 PLAUP00749 431 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 IFI27P40305 119 aaPredicted RBP7.06□□□□□ -1.28
VAPB-201ENST00000265619 MFAP4P55083 255 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 ZADH2Q8N4Q0 377 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 MED13LQ71F56 2210 aa7.06□□□□□ -1.28
VAPB-201ENST00000265619 TRGV5A0A0B4J1U4 118 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 OR11H12B2RN74 326 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 NHLRC4P0CG21 123 aaPredicted RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 ZNF329Q86UD4 541 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 GGNQ86UU5 652 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 OR11H1Q8NG94 326 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 NDFIP1Q9BT67 221 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 SCNM1Q9BWG6 230 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 SPRY4Q9C004 299 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 TMEM167BQ9NRX6 74 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 H3BTX0 84 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 WNT9BO14905 357 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 IGHV3-48P01763 117 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 SMCPP49901 116 aaPredicted RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 MBNL2Q5VZF2 373 aaKnown RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 PTH2Q96A98 100 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 GALMQ96C23 342 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 SLC25A10Q9UBX3 287 aaPredicted RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 TCF19Q9Y242 345 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 IGLL5B9A064 214 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 DUTP33316 252 aaKnown RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 B3GALT5-AS1P59052 145 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
VAPB-201ENST00000265619 ITLN1Q8WWA0 313 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 METRNQ9UJH8 293 aa7.05□□□□□ -1.28
VAPB-201ENST00000265619 TCRBV4S1A1TA0A5B7 111 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 E9PLD3 99 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 K7EM74 188 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 PEX7O00628 323 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 LYZL6O75951 148 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 CATR1Q13166 79 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 Q6ZUT4 128 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 TMEM178AQ8NBL3 297 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 GPR82Q96P67 336 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 ONECUT1Q9UBC0 465 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 RALYQ9UKM9 306 aaKnown RBP7.04□□□□□ -1.28
VAPB-201ENST00000265619 NAV3Q8IVL0 2385 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 F8W1H4 67 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 MOSP00540 346 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 ATP5L2Q7Z4Y8 100 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 SLC25A33Q9BSK2 321 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 AP5S1Q9NUS5 200 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
VAPB-201ENST00000265619 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
VAPB-201ENST00000265619 OR4X2Q8NGF9 303 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms