RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ARPC1AQ92747 370 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 PGPA6NDG6 321 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 UPK2O00526 184 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CECR9P0C854 216 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 FAM106CPP0CH98 169 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 FAM106AQ4KMX7 169 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 PDPNQ86YL7 162 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 LOC400499M0QZD8 3231 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 A0A096LNJ9 63 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 IGHG3P01860 377 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 SAA2P0DJI9 122 aaPredicted RBP10.52□□□□□ -0.73
NUP54-201ENST00000264883 CT45A6P0DMU7 189 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CT45A5P0DMU8 189 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CT45A7P0DMV0 189 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CD69Q07108 199 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CT45A1Q5HYN5 189 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 OR1L4Q8NGR5 311 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 CT45A3Q8NHU0 189 aa10.52□□□□□ -0.73
NUP54-201ENST00000264883 LTAP01374 205 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 IFI27P40305 119 aaPredicted RBP10.51□□□□□ -0.73
NUP54-201ENST00000264883 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
NUP54-201ENST00000264883 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 TSPAN13O95857 204 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
NUP54-201ENST00000264883 C17orf58Q2M2W7 97 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 PATE2Q6UY27 113 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 C1orf229Q6ZS94 237 aaPredicted RBP10.51□□□□□ -0.73
NUP54-201ENST00000264883 ZNF414Q96IQ9 312 aa10.51□□□□□ -0.73
NUP54-201ENST00000264883 E9PLD3 99 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 SLC25A17O43808 307 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 COL8A1P27658 744 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 KIR2DL2P43627 348 aaPredicted RBP10.5□□□□□ -0.73
NUP54-201ENST00000264883 IGFL2Q6UWQ7 119 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 ZNF418Q8TF45 676 aaPredicted RBP10.5□□□□□ -0.73
NUP54-201ENST00000264883 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
NUP54-201ENST00000264883 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 TCRBV4S1A1TA0A5B7 111 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 H3BMG7 143 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
NUP54-201ENST00000264883 DCHS1Q96JQ0 3298 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 PLAUP00749 431 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 RNASE2P10153 161 aaKnown RBP10.49□□□□□ -0.73
NUP54-201ENST00000264883 INSL3P51460 131 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 SSBP2P81877 361 aaPredicted RBP10.49□□□□□ -0.73
NUP54-201ENST00000264883 RIGQ13278 110 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 FDCSPQ8NFU4 85 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 CHAC1Q9BUX1 264 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 LINC00574Q9H8X3 128 aa10.49□□□□□ -0.73
NUP54-201ENST00000264883 SPTBN2O15020 2390 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 LHBP01229 141 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 FOXC1Q12948 553 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 SLC25A48Q6ZT89 311 aaKnown RBP10.48□□□□□ -0.73
NUP54-201ENST00000264883 TTC9CQ8N5M4 171 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 CNEP1R1Q8N9A8 125 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 ZNF502Q8TBZ5 544 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 IGHV1-18A0A0C4DH31 117 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 IGLL5B9A064 214 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 CEACAM4O75871 244 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 FSTL3O95633 263 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 ARMS2P0C7Q2 107 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 GAGE13Q4V321 117 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 LINC00305Q7Z4B0 112 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 OR11H1Q8NG94 326 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 FZR1Q9UM11 496 aa10.48□□□□□ -0.73
NUP54-201ENST00000264883 DNAJC13O75165 2243 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 CCL11P51671 97 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 ERHP84090 104 aaKnown RBP10.47□□□□□ -0.73
NUP54-201ENST00000264883 ZNRF1Q8ND25 227 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
NUP54-201ENST00000264883 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 OVOL3O00110 214 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 SPINK8P0C7L1 97 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 GATA4P43694 442 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 FXYD7P58549 80 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 LEAP2Q969E1 77 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
NUP54-201ENST00000264883 HBDP02042 147 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 TCRAP04437 139 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 C3orf36Q3SXR2 165 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 CIARTQ8N365 385 aaPredicted RBP10.46□□□□□ -0.73
NUP54-201ENST00000264883 RBMXL3Q8N7X1 1067 aaKnown RBP10.46□□□□□ -0.73
NUP54-201ENST00000264883 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 DKK4Q9UBT3 224 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
NUP54-201ENST00000264883 CEND1Q8N111 149 aa10.46□□□□□ -0.74
NUP54-201ENST00000264883 TM2D2Q9BX73 214 aa10.46□□□□□ -0.74
NUP54-201ENST00000264883 SS18L2Q9UHA2 77 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms