RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 HILPDAQ9Y5L2 63 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 MED13LQ71F56 2210 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 A0A1W2PRD5 423 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 A0A1W2PRF3 423 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 A0A1W2PRM7 423 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 C2orf70A6NJV1 201 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 TIMM23O14925 209 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 SIAH2O43255 324 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 COL8A1P27658 744 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 ZNF138P52744 262 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 PLP1P60201 277 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 MUC15Q8N387 334 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 TNFRSF14Q92956 283 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 DLEU1O43261 78 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 Q86TA4 180 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 STPG4Q8N801 248 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 OR8B2Q96RD0 313 aa12.96□□□□□ -0.33
TM9SF1-201ENST00000261789 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.34
TM9SF1-201ENST00000261789 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.34
TM9SF1-201ENST00000261789 OR8B3Q8NGG8 313 aa12.96□□□□□ -0.34
TM9SF1-201ENST00000261789 ZNF785A8K8V0 405 aa12.95□□□□□ -0.34
TM9SF1-201ENST00000261789 MRPL52Q86TS9 123 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-201ENST00000261789 SMIM12Q96EX1 92 aa12.95□□□□□ -0.34
TM9SF1-201ENST00000261789 ARF6P62330 175 aa12.95□□□□□ -0.34
TM9SF1-201ENST00000261789 K7EIM0 57 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 IGLL1P15814 213 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 KLRD1Q13241 179 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 ZNF672Q499Z4 452 aaPredicted RBP12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 LAMTOR2Q9Y2Q5 125 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
TM9SF1-201ENST00000261789 ATRXP46100 2492 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 WNK2Q9Y3S1 2297 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 LY6LH3BQJ8 138 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 RBPJQ06330 500 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 FOXC1Q12948 553 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 COL5A1-AS1Q5SY13 56 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 Q6ZVH6 145 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 ZC2HC1AQ96GY0 325 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 IGHV1-24A0A0C4DH33 117 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 HINT1P49773 126 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 NHLH1Q02575 133 aa12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 TIMM8BQ9Y5J9 83 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-201ENST00000261789 M0R3E3 92 aa12.92□□□□□ -0.34
TM9SF1-201ENST00000261789 CHEK1O14757 476 aa12.92□□□□□ -0.34
TM9SF1-201ENST00000261789 TSPOP30536 169 aa12.92□□□□□ -0.34
TM9SF1-201ENST00000261789 CDSNQ15517 529 aa12.92□□□□□ -0.34
TM9SF1-201ENST00000261789 CT83Q5H943 113 aa12.92□□□□□ -0.34
TM9SF1-201ENST00000261789 IL4P05112 153 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 RBM14Q96PK6 669 aaKnown RBP12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 TRBV19A0A075B6N1 114 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 CSN3P07498 182 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 TMEM14CQ9P0S9 112 aa12.91□□□□□ -0.34
TM9SF1-201ENST00000261789 OVOL3O00110 214 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 NDUFB8O95169 186 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 FCGR2BP31994 310 aaPredicted RBP12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 PAX2Q02962 417 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 TMEM70Q9BUB7 260 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 IGF2RP11717 2491 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 H0Y8G0 127 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 APOHP02749 345 aaPredicted RBP12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 HES1Q14469 280 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 SHANK2-AS3Q9BTD1 123 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 VPS13CQ709C8 3753 aa12.9□□□□□ -0.34
TM9SF1-201ENST00000261789 LINC00614P0C842 121 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 SIGLEC15Q6ZMC9 328 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 BPIFA4PQ86YQ2 179 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 CACNA1BQ00975 2339 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 IGHV3-23P01764 117 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 LIPFP07098 398 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 HTR1DP28221 377 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 CRIP1P50238 77 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 RNF125Q96EQ8 232 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 CELSR1Q9NYQ6 3014 aa12.89□□□□□ -0.35
TM9SF1-201ENST00000261789 hDV102S1A0JD36 115 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 H3BRN7 92 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 NBR2O15453 112 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 LEPROTL1O95214 131 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 OR4F17Q8NGA8 305 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 HLA-DRB1P01911 266 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms