RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DLX6P56179 175 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 LYPD2Q6UXB3 125 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 OR1B1Q8NGR6 318 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 NEU4Q8WWR8 484 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 APC2O95996 2303 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 PGPA6NDG6 321 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 K7EP34 96 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 IGKV1-16P04430 117 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 LGALS7P47929 136 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 GNG5P63218 68 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 VMA21Q3ZAQ7 101 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 ZNF672Q499Z4 452 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 NEGR1Q7Z3B1 354 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 C5orf17Q8NAS9 161 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 TMEM190Q8WZ59 177 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 PERPQ96FX8 193 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 RALYQ9UKM9 306 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 SMIM17P0DL12 118 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 CSN1S1P47710 185 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 SUB1P53999 127 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 TMEM133Q9H2Q1 129 aa8.62□□□□□ -1.03
CHRNA1-201ENST00000261007 IGKV1D-37A0A075B6S9 117 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 A0A1B0GW15 77 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 SAP30O75446 220 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 FCN3O75636 299 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 APOHP02749 345 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 FGF6P10767 208 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 C16orf54Q6UWD8 224 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 LINC00305Q7Z4B0 112 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 TEX45Q8NA69 505 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 OR9G4Q8NGQ1 327 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 LINC01560Q8TB33 94 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 RAB1BQ9H0U4 201 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 CELSR3Q9NYQ7 3312 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 TMEM11P17152 192 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 HSD52Q0P140 79 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 OR10AG1Q8NH19 301 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 C8orf46Q8TAG6 207 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CHRNA1-201ENST00000261007 PTPRZ1P23471 2315 aaPredicted RBP8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 TCRAP04437 139 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 OR4X2Q8NGF9 303 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 OR2K2Q8NGT1 345 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 SPOCK3Q9BQ16 436 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 RPH3ALQ9UNE2 315 aa8.6□□□□□ -1.03
CHRNA1-201ENST00000261007 CD24P25063 80 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 RIPPLY3P57055 190 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 SSBP2P81877 361 aaPredicted RBP8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 RIGQ13278 110 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 LGALS9BQ3B8N2 356 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 LGALS9CQ6DKI2 356 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 TIMD4Q96H15 378 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 ICE1Q9Y2F5 2266 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 C22orf46C9J442 243 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 NDUFS8O00217 210 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 PLAUP00749 431 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 SCGB1A1P11684 91 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 S100A7P31151 101 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 ADORA2A-AS1P86434 159 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 RNF5Q99942 180 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 ZNRD1Q9P1U0 126 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 RABAC1Q9UI14 185 aa8.59□□□□□ -1.03
CHRNA1-201ENST00000261007 A0A1B0GUT8 65 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 H3BUT2 72 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 OVOL3O00110 214 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 COL8A1P27658 744 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 ZNF138P52744 262 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 PSMG4Q5JS54 123 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 BLNKQ8WV28 456 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 JMJD8Q96S16 334 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 TRGV9Q99603 122 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 MCRIP2Q9BUT9 160 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
CHRNA1-201ENST00000261007 PTPRQQ9UMZ3 2332 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 A1L4Q6 167 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 H0Y8G0 127 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 SMAD7O15105 426 aaKnown RBP8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 IGLV2-23P01705 113 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 PLP1P60201 277 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 Q86TA4 180 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 Q9H3A6 140 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 OTORQ9NRC9 128 aa8.57□□□□□ -1.04
CHRNA1-201ENST00000261007 DMXL1Q9Y485 3027 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms