RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 EFNA4P52798 201 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 PAX5Q02548 391 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
CKAP2-201ENST00000258607 PAM16Q9Y3D7 125 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 PEX7O00628 323 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 RPEL1Q2QD12 228 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 OR4A5Q8NH83 315 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 TMEM167BQ9NRX6 74 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 F11RQ9Y624 299 aaKnown RBP7.19□□□□□ -1.26
CKAP2-201ENST00000258607 TRBV12-3P01733 135 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 PFN1P07737 140 aaKnown RBP7.18□□□□□ -1.26
CKAP2-201ENST00000258607 CRISP2P16562 243 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-201ENST00000258607 ERCC8Q13216 396 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 TOMM20LQ6UXN7 152 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 VN1R17PQ8TDU5 208 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 SLC25A39Q9BZJ4 359 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-201ENST00000258607 ZNF331Q9NQX6 463 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-201ENST00000258607 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 NPIPB5A8MRT5 1133 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 HIGD1CA8MV81 97 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 TEX22C9J3V5 150 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 IGKV1-17P01599 117 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 LINC00322Q6ZN03 302 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-201ENST00000258607 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 BTF3L4Q96K17 158 aa7.18□□□□□ -1.26
CKAP2-201ENST00000258607 PRTN3P24158 256 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 AMTP48728 403 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 TPPP2P59282 170 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 TBX15Q96SF7 602 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
CKAP2-201ENST00000258607 KAAG1Q9UBP8 84 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 NOTCH1P46531 2555 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 A0A1W2PRX2 142 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 HAX1O00165 279 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 SERF1AO75920 110 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 AVPP01185 164 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 APOHP02749 345 aaPredicted RBP7.17□□□□□ -1.26
CKAP2-201ENST00000258607 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 Q6ZQT7 251 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 OR4F17Q8NGA8 305 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 ORM1P02763 201 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 TRGV3P03979 118 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 EDN2P20800 178 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 SSX8Q7RTT4 187 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 FAM167A-AS1Q96KT0 104 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 KLK15Q9H2R5 256 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 TP73-AS1Q9UF72 201 aa7.17□□□□□ -1.26
CKAP2-201ENST00000258607 A0A1B0GWJ7 208 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 IGHV2-5P01817 119 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 IGLC1P0CG04 106 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 OR1P1Q8NH06 330 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-201ENST00000258607 GSN-AS1Q9NRJ2 163 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 ZNF586Q9NXT0 402 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 RABAC1Q9UI14 185 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 K7EIM0 57 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 VWC2Q2TAL6 325 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 PITPNC1Q9UKF7 332 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 CENPVL3A0A0U1RRI6 287 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 F6UB75 175 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 P01737 135 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 AMBPP02760 352 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 MRGPRG-AS1Q2M3A8 158 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 HIST3H2BBQ8N257 126 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 TEX45Q8NA69 505 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 FXYD5Q96DB9 178 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 PRORYQ9H606 182 aa7.16□□□□□ -1.26
CKAP2-201ENST00000258607 NPFFO15130 113 aa7.15□□□□□ -1.26
CKAP2-201ENST00000258607 BRS3P32247 399 aa7.15□□□□□ -1.26
CKAP2-201ENST00000258607 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-201ENST00000258607 ERASQ7Z444 233 aa7.15□□□□□ -1.26
CKAP2-201ENST00000258607 SMKR1H3BMG3 65 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 TNFRSF13BO14836 293 aaPredicted RBP7.15□□□□□ -1.27
CKAP2-201ENST00000258607 LMO4P61968 165 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 DEFB136Q30KP8 78 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 C3orf36Q3SXR2 165 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 ETFRF1Q6IPR1 90 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 ZNF705AQ6ZN79 300 aaPredicted RBP7.15□□□□□ -1.27
CKAP2-201ENST00000258607 CACNG8Q8WXS5 425 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 TNFRSF14Q92956 283 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 EPDR1Q9UM22 224 aa7.15□□□□□ -1.27
CKAP2-201ENST00000258607 IGHV7-81A0A0B4J1V7 117 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 B4DEV8 164 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 SNAI2O43623 268 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 HLA-DRB1P01911 266 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 HOXA5P20719 270 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 MFAP4P55083 255 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 SP5Q6BEB4 398 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-201ENST00000258607 STXBP6Q8NFX7 210 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 PIMREGQ9BSJ6 248 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 MGAM2Q2M2H8 2515 aa7.14□□□□□ -1.27
CKAP2-201ENST00000258607 CHEK1O14757 476 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms