RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 MAPK1IP1LQ8NDC0 245 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 SMPXQ9UHP9 88 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 FNDC10F2Z333 226 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PRTN3P24158 256 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PLA2G2CQ5R387 149 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PRRC2BQ5JSZ5 2229 aaKnown RBP7.06□□□□□ -1.28
PTCD3-201ENST00000254630 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 IGFL3Q6UXB1 125 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 C15orf62A8K5M9 175 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM75Q8N9X5 138 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 CST9LQ9H4G1 147 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 FNDC4Q9H6D8 234 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM242Q9NWH2 141 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 DERL1Q9BUN8 251 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 GSN-AS1Q9NRJ2 163 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 ZNRD1Q9P1U0 126 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 RPRMLQ8N4K4 120 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 SHANK2-AS3Q9BTD1 123 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 J3QLI3 93 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 FANCMQ8IYD8 2048 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 VCYO14598 125 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 Q86TA4 180 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 SS18Q15532 418 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 TRAV8-2A0A0B4J237 113 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 A0A0U1RRA0 63 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 J3QKU1 62 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 CXCL1P09341 107 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
PTCD3-201ENST00000254630 ITGB1BP1O14713 200 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 TNFSF13O75888 250 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 GATD1Q8NB37 220 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 RFNGQ9Y644 331 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 LY96Q9Y6Y9 160 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 A0A087WWL8 130 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 LINC00587B1AMM8 73 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 CFHR2P36980 270 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 PRSS33Q8NF86 280 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 OVOL3O00110 214 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 CLDN16Q9Y5I7 305 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 IGKV1-16P04430 117 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 LYL1P12980 280 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 C14orf178Q8N769 122 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BKO60814 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 AMBPP02760 352 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BJP06899 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BOP23527 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BBP33778 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BDP58876 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BCP62807 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HSD52Q0P140 79 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST2H2BEQ16778 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-201ENST00000254630 C1orf122Q6ZSJ8 110 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BHQ93079 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BNQ99877 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 HIST1H2BMQ99879 126 aa7.04□□□□□ -1.28
PTCD3-201ENST00000254630 GGTLC3B5MD39 225 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 DEFB131AP59861 70 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 PROK2Q9HC23 129 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 UNC13CQ8NB66 2214 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 A0A1W2PPI3 338 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 GATA4P43694 442 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 FHL1Q13642 323 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 TCF20Q9UGU0 1960 aaKnown RBP7.03□□□□□ -1.28
PTCD3-201ENST00000254630 A0A0G2JRQ6 117 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 UBE2CO00762 179 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 C17orf58Q2M2W7 97 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 TRPT1Q86TN4 253 aaKnown RBP7.03□□□□□ -1.28
PTCD3-201ENST00000254630 CFHR3Q02985 330 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 DMRTC2Q8IXT2 367 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-201ENST00000254630 GFRA4Q9GZZ7 299 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 LINC01551Q86U37 167 aa7.03□□□□□ -1.28
PTCD3-201ENST00000254630 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.02□□□□□ -1.28
PTCD3-201ENST00000254630 SMKR1H3BMG3 65 aa7.02□□□□□ -1.28
PTCD3-201ENST00000254630 DMRTA1Q5VZB9 504 aa7.02□□□□□ -1.28
PTCD3-201ENST00000254630 FAM120AOSQ5T036 256 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 E9PQ18 207 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 LEPROTO15243 131 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 CEACAM8P31997 349 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-201ENST00000254630 APOC4P55056 127 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 TEX36Q5VZQ5 186 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 DKK1O94907 266 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 HS3ST6Q96QI5 342 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 JPT2Q9H910 190 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 A0A1B0GV72 72 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms