RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IGKV1-17P01599 117 aa17.15■□□□□ 0.34
SH2D3A-201ENST00000245908 P01737 135 aa17.15■□□□□ 0.34
SH2D3A-201ENST00000245908 CAMPP49913 170 aa17.15■□□□□ 0.34
SH2D3A-201ENST00000245908 SSBP4Q9BWG4 385 aaPredicted RBP17.15■□□□□ 0.34
SH2D3A-201ENST00000245908 SOX21Q9Y651 276 aaPredicted RBP17.15■□□□□ 0.34
SH2D3A-201ENST00000245908 HBBP68871 147 aa17.14■□□□□ 0.33
SH2D3A-201ENST00000245908 Q86TA4 180 aa17.14■□□□□ 0.33
SH2D3A-201ENST00000245908 MUC6Q6W4X9 2439 aa17.14■□□□□ 0.33
SH2D3A-201ENST00000245908 OR4C5Q8NGB2 326 aa17.14■□□□□ 0.33
SH2D3A-201ENST00000245908 K7EIM0 57 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 CNIH1O95406 144 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 NTF3P20783 257 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 GPR6P46095 362 aaPredicted RBP17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 GTSF1Q8WW33 167 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 BORCS7Q96B45 105 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 GFRA4Q9GZZ7 299 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 TRAV30A0A087WSZ9 112 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 HOXB4P17483 251 aaPredicted RBP17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 HTR1DP28221 377 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 RPS20P60866 119 aaKnown RBP17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 OR11H6Q8NGC7 330 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 TMEM190Q8WZ59 177 aa17.13■□□□□ 0.33
SH2D3A-201ENST00000245908 NPIPB6E9PJ23 425 aa17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 Q6ZVH6 145 aa17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 CFHR4Q92496 578 aa17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 DPM3Q9P2X0 92 aa17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 NBR2O15453 112 aa17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 DAZAP1Q96EP5 407 aaKnown RBP17.12■□□□□ 0.33
SH2D3A-201ENST00000245908 TRBV6-1A0A0K0K1D8 114 aa17.11■□□□□ 0.33
SH2D3A-201ENST00000245908 HSBP1O75506 76 aa17.11■□□□□ 0.33
SH2D3A-201ENST00000245908 IGLV2-11P01706 119 aa17.11■□□□□ 0.33
SH2D3A-201ENST00000245908 SHANK2-AS3Q9BTD1 123 aa17.11■□□□□ 0.33
SH2D3A-201ENST00000245908 FAM231BA6NCW3 169 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 H3BRN7 92 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 EXOC3-AS1Q8N2X6 119 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 TRAV9-2A0A087WT02 112 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 NDUFA3O95167 84 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 RBPMS2Q6ZRY4 209 aaKnown RBP17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 SMIM15Q7Z3B0 74 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 NPBQ8NG41 125 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 OR4F17Q8NGA8 305 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 RAB1BQ9H0U4 201 aa17.1■□□□□ 0.33
SH2D3A-201ENST00000245908 TRAV8-1A0A0A6YYK1 113 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 CCL21O00585 134 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 ARF6P62330 175 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 GOLT1AQ6ZVE7 132 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 PGLYRP4Q96LB8 373 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 TRBV19A0A075B6N1 114 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 RHOGP84095 191 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 RNF151Q2KHN1 245 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 RNF24Q9Y225 148 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 HILPDAQ9Y5L2 63 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
SH2D3A-201ENST00000245908 TLN1Q9Y490 2541 aaKnown RBP17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 LY6HO94772 140 aa17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 CEACAM3P40198 252 aa17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 RNASEKQ6P5S7 137 aaKnown RBP17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 C16orf54Q6UWD8 224 aa17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 BPIFA4PQ86YQ2 179 aa17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 CIARTQ8N365 385 aaPredicted RBP17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 TIMD4Q96H15 378 aa17.08■□□□□ 0.33
SH2D3A-201ENST00000245908 FAM181BA6NEQ2 426 aa17.08■□□□□ 0.32
SH2D3A-201ENST00000245908 M0R1W7 72 aa17.08■□□□□ 0.32
SH2D3A-201ENST00000245908 M0R2Z0 102 aa17.08■□□□□ 0.32
SH2D3A-201ENST00000245908 PTPRQQ9UMZ3 2332 aa17.08■□□□□ 0.32
SH2D3A-201ENST00000245908 ODF3BA8MYP8 253 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 COL8A1P27658 744 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 MAJINQ3KP22 176 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 FAM162BQ5T6X4 162 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 PRNTQ86SH4 94 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 ATOH7Q8N100 152 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 ZNF491Q8N8L2 437 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 URB1-AS1Q96HZ7 61 aa17.07■□□□□ 0.32
SH2D3A-201ENST00000245908 KLRD1Q13241 179 aa17.06■□□□□ 0.32
SH2D3A-201ENST00000245908 LYPD1Q8N2G4 141 aa17.06■□□□□ 0.32
SH2D3A-201ENST00000245908 TMEM75Q8N9X5 138 aa17.06■□□□□ 0.32
SH2D3A-201ENST00000245908 RNF125Q96EQ8 232 aa17.06■□□□□ 0.32
SH2D3A-201ENST00000245908 ZZEF1O43149 2961 aa17.06■□□□□ 0.32
SH2D3A-201ENST00000245908 CDSNQ15517 529 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 EBLN2Q6P2I7 272 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 SIGLEC15Q6ZMC9 328 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 ANKHD1Q8IWZ3 2542 aaKnown RBP17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 ABCA1O95477 2261 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 WI2-2373I1.2A0A1W2PRP0 233 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 TOX4O94842 621 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 HLA-DRB1P01911 266 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 PRTN3P24158 256 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 ADORA2A-AS1P86434 159 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 LCN12Q6JVE5 192 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 C17orf77Q96MU5 243 aa17.05■□□□□ 0.32
SH2D3A-201ENST00000245908 MRPS12O15235 138 aaKnown RBP17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 VAMP3Q15836 100 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 C5orf64Q2M2E5 130 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 C11orf71Q6IPW1 123 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 Q71RC1 249 aaPredicted RBP17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 ZNF785A8K8V0 405 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 IL4P05112 153 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 PRR31Q5SQ13 230 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 IGFBPL1Q8WX77 278 aa17.04■□□□□ 0.32
SH2D3A-201ENST00000245908 C2orf70A6NJV1 201 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms