RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TICRRQ7Z2Z1 1910 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 Q8TAT8 98 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 ZNF672Q499Z4 452 aaPredicted RBP16.16■□□□□ 0.18
SOX4-201ENST00000244745 ETV2O00321 342 aaPredicted RBP16.15■□□□□ 0.18
SOX4-201ENST00000244745 C18orf32Q8TCD1 76 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 IFI27P40305 119 aaPredicted RBP16.15■□□□□ 0.18
SOX4-201ENST00000244745 PAX8Q06710 450 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 DEFB104AQ8WTQ1 72 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 CHAC1Q9BUX1 264 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 ERG28Q9UKR5 140 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 MAP1BP46821 2468 aaKnown RBP16.15■□□□□ 0.18
SOX4-201ENST00000244745 IGKV1-39P01597 117 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 IGKV1D-39P04432 117 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 CYYR1Q96J86 154 aa16.15■□□□□ 0.18
SOX4-201ENST00000244745 C15orf32Q32M92 178 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 LINC01559Q495D7 138 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 LYPD2Q6UXB3 125 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 NUP37Q8NFH4 326 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 DLX4Q92988 240 aaPredicted RBP16.14■□□□□ 0.17
SOX4-201ENST00000244745 PHF3Q92576 2039 aaKnown RBP16.14■□□□□ 0.17
SOX4-201ENST00000244745 FRMPD3Q5JV73 1810 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 TRBV7-9A0A0J9YWB2 115 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 TOMM40O96008 361 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 PROK2Q9HC23 129 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 RP1L1Q8IWN7 2480 aaPredicted RBP16.14■□□□□ 0.17
SOX4-201ENST00000244745 SDK2Q58EX2 2172 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 RNF182Q8N6D2 247 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 ANAPC1Q9H1A4 1944 aa16.14■□□□□ 0.17
SOX4-201ENST00000244745 SMKR1H3BMG3 65 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 SPINK8P0C7L1 97 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 BUB1B-PAK6H3BSN5 160 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 DPH3Q96FX2 82 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 STPG4Q8N801 248 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 TOMM7Q9P0U1 55 aa16.13■□□□□ 0.17
SOX4-201ENST00000244745 YAE1D1Q9NRH1 226 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 CNTFRP26992 372 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 SIGLEC9Q9Y336 463 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 FNDC10F2Z333 226 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 Q86TA4 180 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 A0A0G2JNJ9 132 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 VOPP1Q96AW1 172 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 Q9UFV3 132 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 FANCMQ8IYD8 2048 aa16.12■□□□□ 0.17
SOX4-201ENST00000244745 PLNP26678 52 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 ZNF503-AS2A6NEH8 195 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 MED12Q93074 2177 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 A0A1W2PRX2 142 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 OVOL1O14753 267 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 WDR86Q86TI4 376 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 TMEM219Q86XT9 240 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 PGPEP1Q9NXJ5 209 aa16.11■□□□□ 0.17
SOX4-201ENST00000244745 PTPRZ1P23471 2315 aaPredicted RBP16.1■□□□□ 0.17
SOX4-201ENST00000244745 RSPO1Q2MKA7 263 aaPredicted RBP16.1■□□□□ 0.17
SOX4-201ENST00000244745 TMEM158Q8WZ71 300 aa16.1■□□□□ 0.17
SOX4-201ENST00000244745 TRAV41A0A0B4J266 112 aa16.1■□□□□ 0.17
SOX4-201ENST00000244745 CD28P10747 220 aa16.1■□□□□ 0.17
SOX4-201ENST00000244745 SSBP2P81877 361 aaPredicted RBP16.1■□□□□ 0.17
SOX4-201ENST00000244745 NDPQ00604 133 aa16.1■□□□□ 0.17
SOX4-201ENST00000244745 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 AMN1Q8IY45 258 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 C9orf118A6NHY6 69 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 NPC2P61916 151 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 YPEL3P61236 119 aaPredicted RBP16.09■□□□□ 0.17
SOX4-201ENST00000244745 TRAV40A0A0B4J280 105 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 RBMY1BA6NDE4 496 aaKnown RBP16.09■□□□□ 0.17
SOX4-201ENST00000244745 RBMY1EA6NEQ0 496 aaKnown RBP16.09■□□□□ 0.17
SOX4-201ENST00000244745 M0R2P5 195 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 RBMY1DP0C7P1 496 aaKnown RBP16.09■□□□□ 0.17
SOX4-201ENST00000244745 RBMY1A1P0DJD3 496 aaKnown RBP16.09■□□□□ 0.17
SOX4-201ENST00000244745 RBMY1CP0DJD4 496 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 TEX43Q6ZNM6 134 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 GFRA4Q9GZZ7 299 aa16.09■□□□□ 0.17
SOX4-201ENST00000244745 MBD3L4A6NDZ8 208 aaPredicted RBP16.08■□□□□ 0.17
SOX4-201ENST00000244745 MBD3L3A6NE82 208 aaPredicted RBP16.08■□□□□ 0.17
SOX4-201ENST00000244745 MBD3L5A6NJ08 208 aaPredicted RBP16.08■□□□□ 0.17
SOX4-201ENST00000244745 ITGB1BP1O14713 200 aa16.08■□□□□ 0.17
SOX4-201ENST00000244745 ZNF474Q6S9Z5 364 aaPredicted RBP16.08■□□□□ 0.17
SOX4-201ENST00000244745 MBD3L2Q8NHZ7 208 aaPredicted RBP16.08■□□□□ 0.17
SOX4-201ENST00000244745 TMEM14BQ9NUH8 114 aa16.08■□□□□ 0.17
SOX4-201ENST00000244745 ATXN8Q156A1 80 aa16.08■□□□□ 0.16
SOX4-201ENST00000244745 C1orf122Q6ZSJ8 110 aa16.08■□□□□ 0.16
SOX4-201ENST00000244745 NPFFR1Q9GZQ6 430 aa16.08■□□□□ 0.16
SOX4-201ENST00000244745 IGHG3P01860 377 aa16.08■□□□□ 0.16
SOX4-201ENST00000244745 CSRP1P21291 193 aaKnown RBP16.08■□□□□ 0.16
SOX4-201ENST00000244745 ZNF114Q8NC26 417 aa16.08■□□□□ 0.16
SOX4-201ENST00000244745 ZC2HC1BQ5TFG8 222 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 HAPLN4Q86UW8 402 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.07■□□□□ 0.16
SOX4-201ENST00000244745 VDAC2P45880 294 aaPredicted RBP16.07■□□□□ 0.16
SOX4-201ENST00000244745 RNF5Q99942 180 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 V9GYV3 84 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 PF4P02776 101 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 IGLL1P15814 213 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 PEMTQ9UBM1 199 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 A0A1W2PPI3 338 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 SPACA3Q8IXA5 215 aa16.07■□□□□ 0.16
SOX4-201ENST00000244745 DNAJC13O75165 2243 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 C5orf64Q2M2E5 130 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 LRRK1Q38SD2 2015 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 ERCC8Q13216 396 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms