RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TRGV9Q99603 122 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 KLHDC3Q9BQ90 382 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 STPG1Q5TH74 334 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 SSC4DQ8WTU2 575 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 LIME1Q9H400 295 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 QSER1Q2KHR3 1735 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 SLC25A16P16260 332 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 NTF4P34130 210 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 FGF6P10767 208 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■■□□ 18.4
TARDBP-201ENST00000240185 C1orf53Q5VUE5 145 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 PRSS57Q6UWY2 283 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 FDCSPQ8NFU4 85 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 LRRC37AA6NMS7 1700 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 A0A1W2PPM0 123 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 PRR19A6NJB7 356 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
TARDBP-201ENST00000240185 C9JQL5 133 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 LILRA1O75019 489 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 TRIP12Q14669 1992 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-201ENST00000240185 H3BMG7 143 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 IGHV3-53P01767 116 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
TARDBP-201ENST00000240185 GAGE5Q13069 117 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 GAGE6Q13070 117 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 FAM168AQ92567 244 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
TARDBP-201ENST00000240185 A0A087WWL8 130 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 IGLL1P15814 213 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 PRSS22Q9GZN4 317 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 GFRA4Q9GZZ7 299 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
TARDBP-201ENST00000240185 COL11A2P13942 1736 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-201ENST00000240185 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-201ENST00000240185 GAS1P54826 345 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 BVES-AS1Q5T3Y7 98 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 Q6ZWC4 215 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
TARDBP-201ENST00000240185 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 ZCCHC24Q8N2G6 241 aaKnown RBP11.33□□□□□ -0.6
TARDBP-201ENST00000240185 FCN3O75636 299 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 COX8AP10176 69 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 TRAV12-1A0A0B4J245 112 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 A0A1W2PR77 199 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 WNT2P09544 360 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 Q86TA4 180 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 CRYBA4P53673 196 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 KIF26BQ2KJY2 2108 aa11.33□□□□□ -0.6
TARDBP-201ENST00000240185 IL18BPO95998 194 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 MST1LQ2TV78 715 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 ARFGEF3Q5TH69 2177 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 MPDZO75970 2070 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 LYPD3O95274 346 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 SPANXCQ9NY87 97 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 TP53TG1Q9Y2A0 90 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
TARDBP-201ENST00000240185 CFHR2P36980 270 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 AMTNQ6UX39 209 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 LYL1P12980 280 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 BOD1L2Q8IYS8 172 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 PRO1854Q9UHT4 67 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 TMEM213A2RRL7 107 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 NDPQ00604 133 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 MED12Q93074 2177 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
TARDBP-201ENST00000240185 SS18Q15532 418 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 CDKN1BP46527 198 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 PSPNO60542 156 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 CRYGSP22914 178 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
TARDBP-201ENST00000240185 RS1O15537 224 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 SYNJ2BPP57105 145 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms