RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CLPSL1A2RUU4 121 aa11.73□□□□□ -0.53
HDHD3-201ENST00000238379 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
HDHD3-201ENST00000238379 CRYBB3P26998 211 aa11.73□□□□□ -0.53
HDHD3-201ENST00000238379 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
HDHD3-201ENST00000238379 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
HDHD3-201ENST00000238379 H3BTX0 84 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 LY6G6DO95868 133 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 C2CD4CQ8TF44 421 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 RPL23P62829 140 aaKnown RBP11.72□□□□□ -0.53
HDHD3-201ENST00000238379 SLC35B1P78383 322 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
HDHD3-201ENST00000238379 OR4F17Q8NGA8 305 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
HDHD3-201ENST00000238379 TRBV19A0A075B6N1 114 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 B4DEV8 164 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 ELANEP08246 267 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 RPL35P42766 123 aaKnown RBP11.71□□□□□ -0.54
HDHD3-201ENST00000238379 FOXE3Q13461 319 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 C17orf77Q96MU5 243 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 HIVEP2P31629 2446 aa11.71□□□□□ -0.54
HDHD3-201ENST00000238379 A0A087WWC5 75 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 PGPA6NDG6 321 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 CLDN34H7C241 214 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 BUB3O43684 328 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 S100A7P31151 101 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
HDHD3-201ENST00000238379 SCGB2A2Q13296 93 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 ADIRFQ15847 76 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 Q9H3A6 140 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 NDUFA4O00483 81 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
HDHD3-201ENST00000238379 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
HDHD3-201ENST00000238379 FAM209BQ5JX69 171 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 LINC01551Q86U37 167 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 RNF152Q8N8N0 203 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 U3KQE9 123 aa11.7□□□□□ -0.54
HDHD3-201ENST00000238379 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
HDHD3-201ENST00000238379 HELTA6NFD8 242 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 Q6ZSV7 163 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 OR5B12Q96R08 314 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 METTL26Q96S19 204 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
HDHD3-201ENST00000238379 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
HDHD3-201ENST00000238379 PGPEP1LA6NFU8 196 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 C9JCJ5 164 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 PEX7O00628 323 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 GGCTO75223 188 aaKnown RBP11.68□□□□□ -0.54
HDHD3-201ENST00000238379 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
HDHD3-201ENST00000238379 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
HDHD3-201ENST00000238379 SRD5A1P18405 259 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 GNG5P63218 68 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
HDHD3-201ENST00000238379 SLC17A3O00476 420 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 TSPAN4O14817 238 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
HDHD3-201ENST00000238379 PDE6HQ13956 83 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 LYPD1Q8N2G4 141 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 LINC00479Q96M42 142 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 AURKAIP1Q9NWT8 199 aaPredicted RBP11.67□□□□□ -0.54
HDHD3-201ENST00000238379 NF1P21359 2839 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 RNF212Q495C1 297 aa11.67□□□□□ -0.54
HDHD3-201ENST00000238379 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
HDHD3-201ENST00000238379 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 ISOC2Q96AB3 205 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 UBE2E2Q96LR5 201 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 GPR82Q96P67 336 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 LY96Q9Y6Y9 160 aa11.66□□□□□ -0.54
HDHD3-201ENST00000238379 ANK3Q12955 4377 aaKnown RBP11.65□□□□□ -0.54
HDHD3-201ENST00000238379 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 TCRAP04437 139 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 GNG4P50150 75 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 CNN1P51911 297 aaKnown RBP11.65□□□□□ -0.54
HDHD3-201ENST00000238379 TAS2R60P59551 318 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 ZNF418Q8TF45 676 aaPredicted RBP11.65□□□□□ -0.54
HDHD3-201ENST00000238379 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 KLF12Q9Y4X4 402 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms