RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FAM57AQ8TBR7 257 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
VAMP4-201ENST00000236192 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 TMEM213A2RRL7 107 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 SAA2P0DJI9 122 aaPredicted RBP10.45□□□□□ -0.74
VAMP4-201ENST00000236192 SLC25A16P16260 332 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 ASCL2Q99929 193 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 SH2D1AO60880 128 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 IGLV3-1P01715 115 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 IGFBP4P22692 258 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 RNF182Q8N6D2 247 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 LTAP01374 205 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 Q6P435 159 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 IGLV3-32A0A0A0MS00 114 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 FOXL2NBQ6ZUU3 175 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 DCTN5Q9BTE1 182 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 NPFFO15130 113 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 EFNA2O43921 213 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PRR20EP86478 221 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PRR20CP86479 221 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PRR20DP86480 221 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PRR20BP86481 221 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PRR20AP86496 221 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 PLXND1Q9Y4D7 1925 aa10.44□□□□□ -0.74
VAMP4-201ENST00000236192 K7EMI3 77 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 LAMTOR5O43504 91 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 PLXNB2O15031 1838 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
VAMP4-201ENST00000236192 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
VAMP4-201ENST00000236192 A0A087WX48 190 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 XGP55808 180 aa10.43□□□□□ -0.74
VAMP4-201ENST00000236192 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
VAMP4-201ENST00000236192 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 M0R381 172 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 Q6ZR03 302 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 CHCHD5Q9BSY4 110 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
VAMP4-201ENST00000236192 CGB1A6NKQ9 187 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 F8VRH5 84 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 ATP5G1P05496 136 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 KLF14Q8TD94 323 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-201ENST00000236192 TRGV9Q99603 122 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 CEACAM4O75871 244 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 ATOX1O00244 68 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 DNAJC30Q96LL9 226 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 ATP5J2P56134 94 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
VAMP4-201ENST00000236192 TDHQ8IZJ6 230 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 NXPH1P58417 271 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 THSD7AQ9UPZ6 1657 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 UQCRQO14949 82 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 C6orf15Q6UXA7 325 aaPredicted RBP10.4□□□□□ -0.74
VAMP4-201ENST00000236192 CARD19Q96LW7 228 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 RLFQ13129 1914 aa10.4□□□□□ -0.74
VAMP4-201ENST00000236192 HEATR5BQ9P2D3 2071 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 TRGV5A0A0B4J1U4 118 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 SMIM9A6NGZ8 99 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 AGFG2O95081 481 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 CFC1BP0CG36 223 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 CFC1P0CG37 223 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 SLC25A15Q9Y619 301 aa10.4□□□□□ -0.75
VAMP4-201ENST00000236192 CCL13Q99616 98 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 ZNF106Q9H2Y7 1883 aaKnown RBP10.39□□□□□ -0.75
VAMP4-201ENST00000236192 CD3EP07766 207 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 LINC00205P59089 165 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 SLC22A18ASQ8N1D0 253 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 CHCHD2Q9Y6H1 151 aaPredicted RBP10.39□□□□□ -0.75
VAMP4-201ENST00000236192 FANCMQ8IYD8 2048 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 THBDP07204 575 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 RNASE2P10153 161 aaKnown RBP10.39□□□□□ -0.75
VAMP4-201ENST00000236192 PLA2G2FQ9BZM2 168 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 RHODO00212 210 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 NDUFC2O95298 119 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
VAMP4-201ENST00000236192 MAGEA5P43359 124 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 IL11RAQ14626 422 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 Q6ZS92 163 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 HELZP42694 1942 aaKnown RBP10.38□□□□□ -0.75
VAMP4-201ENST00000236192 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 C3orf22Q8N5N4 141 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 ZNF524Q96C55 264 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 C16orf92Q96LL3 132 aa10.38□□□□□ -0.75
VAMP4-201ENST00000236192 MRPL20Q9BYC9 149 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms