RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 SAA4P35542 130 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 UBE2E1P51965 193 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 DYNAPQ8N1N2 210 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 OR5AU1Q8NGC0 362 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 OR1P1Q8NH06 330 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 GATAD1Q8WUU5 269 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 HIST1H2BAQ96A08 127 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 ACY3Q96HD9 319 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 SLC35E1Q96K37 410 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 P2RX4Q99571 388 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 RNF5Q99942 180 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 SLC35B3Q9H1N7 401 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 PXMP4Q9Y6I8 212 aa4.28□□□□□ -1.72
TRAPPC13-201ENST00000231526 IGHV3OR16-10A0A075B7F0 116 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 CTXND1A0A1B0GTU2 59 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 VCYO14598 125 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 DDTP30046 118 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 OR2T10Q8NGZ9 312 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 FAM103A1Q9BTL3 118 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TEX15Q9BXT5 2789 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 ZNF469Q96JG9 3925 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 PRRC2AP48634 2157 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 NOTCH2Q04721 2471 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 SONP18583 2426 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 IGKV1OR2-108A0A075B7D4 117 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 IGHV3-21A0A0B4J1V1 117 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TRAV1-1A0A0B4J248 108 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TRAV40A0A0B4J280 105 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 IGLC7A0M8Q6 106 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 INS-IGF2F8WCM5 200 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 PDE6DO43924 150 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 GATA2P23769 480 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TCL1AP56279 114 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 CKS1BP61024 79 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 CLEC12BQ2HXU8 276 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 AWAT1Q58HT5 328 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 C15orf54Q8N8G6 183 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 MALSU1Q96EH3 234 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 SCRT1Q9BWW7 348 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TMPRSS5Q9H3S3 457 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 FNDC4Q9H6D8 234 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 KMT2BQ9UMN6 2715 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-201ENST00000231526 TRBV9A0A0B4J1U6 114 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 CENPVL3A0A0U1RRI6 287 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 C7orf77A4D0Y5 90 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 OOSP1A8MZH6 123 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 VWC2LB2RUY7 222 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FNDC10F2Z333 226 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 SOX15O60248 233 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 BCL2P10415 239 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 OR10J1P30954 320 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 BRS3P32247 399 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FXYD3Q14802 87 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 KHDC3LQ587J8 217 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FAM24BQ8N5W8 94 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 SMDT1Q9H4I9 107 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 ITPR2Q14571 2701 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 NPFFO15130 113 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 YIF1AO95070 293 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 NDUFA3O95167 84 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 IFNA1P01562 189 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 HSPB1P04792 205 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FAM106CPP0CH98 169 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FOLR2P14207 255 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 PAX8Q06710 450 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 ICAM4Q14773 271 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 FAM78BQ5VT40 261 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 RUSC1-AS1Q66K80 236 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 BRD3OSQ6XYD6 125 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 SLC35E3Q7Z769 313 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 CYB561D1Q8N8Q1 229 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 PPDPFQ9H3Y8 114 aa4.26□□□□□ -1.73
TRAPPC13-201ENST00000231526 CORTO00230 105 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 EIF4EBP3O60516 100 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 MSMBP08118 114 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 C8orf88P0DMB2 117 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 PAX1P15863 534 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 RAB5AP20339 215 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 PSMB3P49720 205 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 RND2P52198 227 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 ZNF506Q5JVG8 444 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 NPBQ8NG41 125 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 C1RLQ9NZP8 487 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 VAX2Q9UIW0 290 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 F11RQ9Y624 299 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 B4DSR2 109 aa4.25□□□□□ -1.73
TRAPPC13-201ENST00000231526 AP4M1O00189 453 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms