RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 C5orf56Q8N8D9 126 aa8.35□□□□□ -1.07
CDCA3-201ENST00000229265 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
CDCA3-201ENST00000229265 GPR82Q96P67 336 aa8.35□□□□□ -1.07
CDCA3-201ENST00000229265 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
CDCA3-201ENST00000229265 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
CDCA3-201ENST00000229265 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
CDCA3-201ENST00000229265 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 FAM223BA6NKX1 122 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 ZNF253O75346 499 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 PRB3Q04118 309 aaPredicted RBP8.34□□□□□ -1.07
CDCA3-201ENST00000229265 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 TEX38Q6PEX7 206 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 FAM223AQ8IWN6 122 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 C5orf17Q8NAS9 161 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 ELOVL1Q9BW60 279 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 FBXL7Q9UJT9 491 aa8.34□□□□□ -1.07
CDCA3-201ENST00000229265 IGHV3OR16-10A0A075B7F0 116 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 TRAV5A0A0B4J249 113 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 TMEM89A2RUT3 159 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 PGPA6NDG6 321 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 GGTLC3B5MD39 225 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 H3BRN7 92 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 AP4M1O00189 453 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 UBE2CO00762 179 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 EIF3GO75821 320 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDCA3-201ENST00000229265 CTSGP08311 255 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 GP9P14770 177 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 CD24P25063 80 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 MEOX2P50222 304 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 PSG9Q00887 426 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 C1orf194Q5T5A4 169 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 UNQ5815/PRO19632Q6UWF5 114 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 ZNF329Q86UD4 541 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 SPATA3Q8NHX4 192 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 RNF125Q96EQ8 232 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 USMG5Q96IX5 58 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 SAV1Q9H4B6 383 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-201ENST00000229265 CLEC5AQ9NY25 188 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 IL36BQ9NZH7 164 aa8.33□□□□□ -1.08
CDCA3-201ENST00000229265 TRBV20OR9-2A0A075B6H5 130 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 A6NDX4 124 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 K7EQM0 130 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 BMPR1BO00238 502 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 PEX7O00628 323 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 IGHG2P01859 326 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 S100A8P05109 93 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 CXCL1P09341 107 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 RPL7P18124 248 aaKnown RBP8.32□□□□□ -1.08
CDCA3-201ENST00000229265 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 C9orf139Q6ZV77 190 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 ZNF502Q8TBZ5 544 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 DUX5Q96PT3 197 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 ATG101Q9BSB4 218 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 ZFP30Q9Y2G7 519 aa8.32□□□□□ -1.08
CDCA3-201ENST00000229265 TRBV19A0A075B6N1 114 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 FAM231BA6NCW3 169 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 ZNF98A6NK75 572 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 IGHV3-48P01763 117 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 HOXA5P20719 270 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 LYZP61626 148 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 RANP62826 216 aaKnown RBP8.31□□□□□ -1.08
CDCA3-201ENST00000229265 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-201ENST00000229265 Q56UQ5 140 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 C19orf54Q5BKX5 351 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 BAGE2Q86Y30 109 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 OR5T1Q8NG75 326 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 FAM103A1Q9BTL3 118 aaKnown RBP8.31□□□□□ -1.08
CDCA3-201ENST00000229265 DERL1Q9BUN8 251 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 PRDM13Q9H4Q3 707 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 URGCP-MRPS24S4R325 110 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 PKD1L1Q8TDX9 2849 aa8.31□□□□□ -1.08
CDCA3-201ENST00000229265 TRAV41A0A0B4J266 112 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 A0A0G2JLM5 398 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-201ENST00000229265 ATP6V0E1O15342 81 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 IGLV2-8P01709 118 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 IL4P05112 153 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 APELAP0DMC3 54 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 IGHV4-38-2P0DP08 117 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 PYYP10082 97 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 ERVFC1-1P60608 527 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 UBE2G1P62253 170 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 NDPQ00604 133 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 ATP5G2Q06055 141 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 KIAA0141Q14154 515 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-201ENST00000229265 CENPWQ5EE01 88 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
CDCA3-201ENST00000229265 RABAC1Q9UI14 185 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms