RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 NRN1Q9NPD7 142 aa12.23□□□□□ -0.45
TGFB1-201ENST00000221930 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 A0A1W2PS18 150 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 PMCHL1Q16048 86 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 TMEM133Q9H2Q1 129 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 IZUMO1RA6ND01 250 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 APCSP02743 223 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 AZU1P20160 251 aa12.22□□□□□ -0.45
TGFB1-201ENST00000221930 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
TGFB1-201ENST00000221930 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
TGFB1-201ENST00000221930 CEACAM3P40198 252 aa12.21□□□□□ -0.45
TGFB1-201ENST00000221930 ZNF137PP52743 207 aa12.21□□□□□ -0.45
TGFB1-201ENST00000221930 PGPA6NDG6 321 aa12.21□□□□□ -0.46
TGFB1-201ENST00000221930 SLC25A5P05141 298 aaKnown RBP12.21□□□□□ -0.46
TGFB1-201ENST00000221930 FBXL19-AS1Q494R0 122 aa12.21□□□□□ -0.46
TGFB1-201ENST00000221930 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.46
TGFB1-201ENST00000221930 NUP35Q8NFH5 326 aa12.21□□□□□ -0.46
TGFB1-201ENST00000221930 SSBP4Q9BWG4 385 aaPredicted RBP12.21□□□□□ -0.46
TGFB1-201ENST00000221930 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.46
TGFB1-201ENST00000221930 AKAP6Q13023 2319 aa12.21□□□□□ -0.46
TGFB1-201ENST00000221930 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.46
TGFB1-201ENST00000221930 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 GDF5OSQ5U4N7 250 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 NEGR1Q7Z3B1 354 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 KAAG1Q9UBP8 84 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 CAMPP49913 170 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 UBE2G1P62253 170 aa12.2□□□□□ -0.46
TGFB1-201ENST00000221930 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 NTF3P20783 257 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
TGFB1-201ENST00000221930 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 EPDR1Q9UM22 224 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 HIGD1CA8MV81 97 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 CD5LO43866 347 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 COX7A1P24310 79 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 MYCNOSP40205 109 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 MPV17L2Q567V2 206 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 PERPQ96FX8 193 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 WNT10AQ9GZT5 417 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
TGFB1-201ENST00000221930 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 CKS1BP61024 79 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 BVES-AS1Q5T3Y7 98 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 SIGLEC9Q9Y336 463 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 HRNRQ86YZ3 2850 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 ARHGAP32A7KAX9 2087 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 CRYGCP07315 174 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 COX19Q49B96 90 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 FAM231DQ6ZW35 169 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 TEX45Q8NA69 505 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 C18orf32Q8TCD1 76 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
TGFB1-201ENST00000221930 RALYQ9UKM9 306 aaKnown RBP12.18□□□□□ -0.46
TGFB1-201ENST00000221930 IGHV1-3A0A0C4DH29 117 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 IGLV1-47P01700 117 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 TMEM116Q8NCL8 245 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 LINC01560Q8TB33 94 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 IGFBPL1Q8WX77 278 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 C7orf69Q9H7B7 122 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 KLRB1Q12918 225 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 C12orf54Q6X4T0 127 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 GTF2H5Q6ZYL4 71 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
TGFB1-201ENST00000221930 SMAGPQ0VAQ4 97 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 TRGV9Q99603 122 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 BUB1B-PAK6H3BSN5 160 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
TGFB1-201ENST00000221930 CD24P25063 80 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 SHISA2Q6UWI4 295 aa12.16□□□□□ -0.46
TGFB1-201ENST00000221930 TRAV8-1A0A0A6YYK1 113 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 J3KRW8 73 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 CRYGBP07316 175 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 GP9P14770 177 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 CA7P43166 264 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 LYZP61626 148 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 ZFHX3Q15911 3703 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
TGFB1-201ENST00000221930 ATOH7Q8N100 152 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 GPR82Q96P67 336 aa12.15□□□□□ -0.46
TGFB1-201ENST00000221930 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms